Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1815 ATGAAGGAGGGTGGTGGTCGGAAGCAAGGTGCAATGTCGCCGTGTGCGGCATGCAAGCTTCTCCGGCGGCGATGCGCAAAGGATTGCGTGTTTGCACCGTATTTCCCGGCTGATGAGCCCCAGAAATTTGGGAGTGTCCACAAGGTTTTTGGTGCTAGCAATGTCAACAAGATGTTACAGGAACTACCAGAGCACCAAAGAAGTGATGCAGTGAGTTCAATGGTGTATGAGGCAAATGCAAGAGTAAGAGACCCTGTCTATGGATGTGTGGGTGCAATATCTTCTCTTCAGCAACAAGTTGATGTTCTCCGAACCCAATTGGCTCTTGCACAAGCCGAAGTTGTTCACATGAGAATGCGCCAATTCCCATCATCTAATCATCATGACACTCCAATTTCATCTTCATCGAATCATTACCATCCAATTTCATCATCACCATCAGAGAATAACAATAATTTGAGCCAGACCAAGTCCCTTTTTTCCATGGACATGGTCCTTGATCATCAATCCAATATGGGACAGTCCCTTTGGTCATGCTAG 540 0.4648 MKEGGGRKQGAMSPCAACKLLRRRCAKDCVFAPYFPADEPQKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLRTQLALAQAEVVHMRMRQFPSSNHHDTPISSSSNHYHPISSSPSENNNNLSQTKSLFSMDMVLDHQSNMGQSLWSC* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1815 179 Coils Coil 93 113 - -
Ahy7g1815 179 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Ahy7g1815 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 175 - -
Ahy7g1815 179 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Ahy7g1815 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 175 - -
Ahy7g1815 179 MobiDBLite consensus disorder prediction 124 154 - -
Ahy7g1815 179 MobiDBLite consensus disorder prediction 123 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1815 Ahy-Chr7 67891775 67897959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1815 1 179 AS2 family AT1G31320 68.333 5.19e-71 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy7g1815 LOB 1.10E-42 No_clan