Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1798 ATGGACAATACTACAACCCTTTGCACCAAAATAAATAGTGATAGTGAGAAGAGTAAGATAACAAGAGAGCTTCTTAATGGCCATGAAGCTGCAACTCAGCTGAAGCTTCTTCTTCTTAAGAATCCCAATGGAGGGTCTTCTCTCTCAGCTGAAGAGCTTCTTGCCAATGTCCTCAGATCCTTCAATGAAATCCTTTCCATTCTCTCTTCCCAAAATGCTGGGATTAAGGCGGCAGATGATTCTGATCAGTGTAAGAACAAAAGAACCGCCACAAAGACAGCAAGAGGAAGAGGTTGCTACAAAAGAAGGAGTAGTCCAGACACATGGACCATAGTTTCGCTCACTGCTGATGATAATTACACATGGAGGAAATATGGACAGAAACAAATCTTGAGTTCTATATTTCCAAGGAGCTACTTTAGATGCAGTAGAAAGTATGAGGAGGGTTGCCGGGCAATCAAACAGGTGCAAAAGACACAAGAGAATCCTATTATGTACCAAACTACCTACACTGGCATGCATACATGCAAATCCACTCCCAATAGTAATAATAATGTTCCACGTTTGCTTGTGAATTCTCAGAATCATCATCATGATTCTAAGGTATCCAATGAAAAGGATTATTACCCTATAATTAGTCCTCTAACTCCAACTGTCACACAAGAACATGCTAAAGAAGATTCACCTAGTGATGTTGGAGATCATAAACTGGATCCTGTTTGGTCGGATTTGAAGGATTTTGAACCGTCCATCAAGCCTTCCATTAACTTGGTAAAGAATTTTGGCACTCATGATGATGATGAGTTCCACCACTTTGATGCTTTCTTAGCTTCCTAA 837 0.4026 MDNTTTLCTKINSDSEKSKITRELLNGHEAATQLKLLLLKNPNGGSSLSAEELLANVLRSFNEILSILSSQNAGIKAADDSDQCKNKRTATKTARGRGCYKRRSSPDTWTIVSLTADDNYTWRKYGQKQILSSIFPRSYFRCSRKYEEGCRAIKQVQKTQENPIMYQTTYTGMHTCKSTPNSNNNVPRLLVNSQNHHHDSKVSNEKDYYPIISPLTPTVTQEHAKEDSPSDVGDHKLDPVWSDLKDFEPSIKPSINLVKNFGTHDDDEFHHFDAFLAS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1798 278 Pfam WRKY DNA -binding domain 117 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g1798 278 ProSiteProfiles WRKY domain profile. 117 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g1798 278 SUPERFAMILY WRKY DNA-binding domain 113 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy7g1798 278 MobiDBLite consensus disorder prediction 216 235 - -
Ahy7g1798 278 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 258 IPR044810 GO:0003700
Ahy7g1798 278 SMART WRKY_cls 116 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g1798 278 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 13 258 - -
Ahy7g1798 278 Gene3D WRKY domain 108 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1798 Ahy-Chr7 67248920 67253507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1798 15 244 WRKY Transcription Factor Family AT3G56400 34.263 2.83e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy7g1798 WRKY 1.00E-22 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1635 17 34852910 34858489 Ahy7g1798 7 67248920 67253507 hybridization