Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1786 ATGGGGGGTGGTTGGAGAAGAGCGTTCTGCACCCGTAACCCAGAATCCACAATTTTACATAACCAACACCGAAGCCAATCCCCAACCACCTGCGTCAGATTGAGCTTCCTCTCAGTCTCAGACACCGCAGATTCAACATCAAATCCATCCACTCCACGCTCCCCTAGCTTCAAGCTATCCCTGTTCAGAAACAGCTTCAAATTCAGAAGTAGTTGTGGAATCTGTTTGAACAGCGTGAAGACGGGGCTGGGAACGGCAATTTACACTGCGGAATGCGGTCATGCTTTTCACTCCCCCTGCATCGTCGGCCACGTCAGCAGCAACAACACGTGCCCCGTCTGCAACGCCACGTGGAAAGTCGTTCCTGCCCTTCCGCAACAAAACGACGTCGTAACCACCAAAATATTCGAAGCGAAGAAGCAATCCGATTCGGTAAGACCATACGACGACGATGAGCCTCTCCCTTCTCCCTTCTCCGGTTGCCAAATCGCTCCGATTCCGGAGGCCGACGAAAACAACGACGACGAAGACCAAAACGACGTTTTCCAGGGCTTTTTCGTAAATCCATCAAAGCCTCCAATGATAACGAAGGACGCTGATTCAAGGAATGTACGGGTGAAGCTGATGCCAGAGTGTGCTGTCATAACGTCGTCACAGAGCCACGAGACTTATGCTTTGGTTCTAAGAGTCAAGGCTCCGCCACCGCCATCGTGTAGTCAGATCGGTGCCTCGCCACCGGTGGATCTTGTCACGGTTGTCAACGTCGGCGCCGGCATGAGCGGCACGAAGCTTCATATGCTGAAGCGTGCGATGCGTTTGGTTATCTCATCGCTCGGCTCCGTCGACCGGCTCGCAATCGTGGCTTATTCGGATTCATCGAAACGGTTGATGCCGCTGCGGAGAATGACGGCGCAGGGACAGCGGGTGGCTCGGCGCATCGTCGACCGCCTCATCTCCGGCCGACAAATAGCCGCCTCAGGCGGTGTAGAAGCTCTGAGGAAAGCAGCGAAGGTTCTAGAAGACCGAAGGGAAAGAAATCCGTTGGCCTCCGTTGTTCTCTTCTCAGAAACAAGTAATTGGAAGAATCAACGAGAAAGCTTCGGCTTCAGCCACGTGTCTTCCCGGTTCACCTTTATAGAAGTCCCGGTTCAATCGTTTGGGTTCGGGAAAAGAACCTTGTTCGGCTTCCAACCGGATGAGGATCATTGTGCGAAGCGCATTGAGGAATTATTCAGCGTAACGGTGCATGATTTAACAGTTCAGCTCGGAGTTTCATCGCATCATGCTGAGATCAGAGATGTTTATTCCTGTAATAATGGACGGCCCACATCGCTTGGCTCTGAAGCCTTTACGATTGGCGATTTGTACGCTGAAGAAGAGAGGGAACTGTTGGTGGAGTTGAGAGTGGCCACGTCAGCATTGGGAAGCCATCACGTGATGAACGTGAAGTGTGTCTATAAAGATTCGGTGAAACAGGACACTGTGTGCGGTAGGGAGCAAGCGCTTCCAGTGGCGCTACGGCTTGGTGGCAGAGCCGAGAGGCTTAGGAATGTGTTTGTGACGAGCCGAGCCATTTCCAAGTCAAGGAAACTGTTGGATCAGAATGAGTTTTCCAATGCTTATTGTGTGGTGGTTTCGGCTCGAGAGCTTTTAGCTCAGTGTGGCTCGGCTTCAGTGGACGAGTATGTGCGTGGCTTGGAGGCTGAGCTGGCAGAGATTCAGTGGCAGAAAGCACAGTATGAGAGGCAAGGGAGGGCGGTGGATGAGAGTGGCGAGGAGGCATTGACACCGACTTCAGCTTGGAGAGCAGCTGAGAAGCTGGCTAAGATGGCAACAATGAAGAAGTCATTGAATAGAGTCACTGACTTGCACGGCTTCGAAAATGCTAGGTTCTAG 1896 0.5237 MGGGWRRAFCTRNPESTILHNQHRSQSPTTCVRLSFLSVSDTADSTSNPSTPRSPSFKLSLFRNSFKFRSSCGICLNSVKTGLGTAIYTAECGHAFHSPCIVGHVSSNNTCPVCNATWKVVPALPQQNDVVTTKIFEAKKQSDSVRPYDDDEPLPSPFSGCQIAPIPEADENNDDEDQNDVFQGFFVNPSKPPMITKDADSRNVRVKLMPECAVITSSQSHETYALVLRVKAPPPPSCSQIGASPPVDLVTVVNVGAGMSGTKLHMLKRAMRLVISSLGSVDRLAIVAYSDSSKRLMPLRRMTAQGQRVARRIVDRLISGRQIAASGGVEALRKAAKVLEDRRERNPLASVVLFSETSNWKNQRESFGFSHVSSRFTFIEVPVQSFGFGKRTLFGFQPDEDHCAKRIEELFSVTVHDLTVQLGVSSHHAEIRDVYSCNNGRPTSLGSEAFTIGDLYAEEERELLVELRVATSALGSHHVMNVKCVYKDSVKQDTVCGREQALPVALRLGGRAERLRNVFVTSRAISKSRKLLDQNEFSNAYCVVVSARELLAQCGSASVDEYVRGLEAELAEIQWQKAQYERQGRAVDESGEEALTPTSAWRAAEKLAKMATMKKSLNRVTDLHGFENARF* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1786 631 SMART ring_2 72 114 IPR001841 -
Ahy7g1786 631 ProSiteProfiles VWFA domain profile. 248 467 IPR002035 -
Ahy7g1786 631 PANTHER E3 UBIQUITIN-PROTEIN LIGASE WAV3 21 631 - -
Ahy7g1786 631 Pfam RING-like zinc finger 72 101 IPR001841 -
Ahy7g1786 631 SUPERFAMILY vWA-like 245 358 IPR036465 -
Ahy7g1786 631 Pfam von Willebrand factor type A domain 249 355 IPR002035 -
Ahy7g1786 631 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 38 120 IPR013083 -
Ahy7g1786 631 Gene3D von Willebrand factor, type A domain 249 441 IPR036465 -
Ahy7g1786 631 Coils Coil 563 583 - -
Ahy7g1786 631 SUPERFAMILY RING/U-box 66 123 - -
Ahy7g1786 631 ProSiteProfiles Zinc finger RING-type profile. 72 115 IPR001841 -
Ahy7g1786 631 CDD RING-H2 72 115 - -
Ahy7g1786 631 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 21 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1786 Ahy-Chr7 66633184 66635471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1786 41 130 C3H Transcription Factor Family AT2G18670 25.556 3.59e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1786 - - gmx:100819417 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3079 17 132201774 132205007 Ahy7g1786 7 66633184 66635471 hybridization