Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1733 ATGCTTCCTTTTGGGGGCAGATTCTACGGGTTCGAGAGCTGGCTAGACCATCCTCACCAACACCACTCATCACCCTCTGATGGGTTTTTTGTTCCCGAAGCACCTTTCAAGGCAACGGATCTATTATTCGACGGAGCAGGCAGATCATCCAAACTGGATAATAATAGGAAATCAACGGAAGCCTGCAAGAGCCACAGGGAAGCCGAGAGGAGGCGCAGGCAGCGAATCAACGCTCATCTTTCCACCCTTCGCTCCCTCCTCCCAAACACCGCGAAGGCAGATAAGGCGTCGTTGCTGGCGGAAGTGGTAAAGCACGTGAAGCGGCTAAAGAAAGAGGCCGATGACGTGGCACGAGACCCGTCCAAACCCGACGCCGAAGCAGAACCGTGGCCGTTTCCGGGTGAAGCCGACGAGGCAACACTCAGCTACTGCGACGGAGAACCGAACCTGGTGAAGGCGACGCTGTGCTGCGAGGACCGTCCCGGTCTGAACCGGGACCTGACGCATGCGATTCGGTCAGTTCGAGCGAAAGCGGTTCGGGCCGAGATGATGACGGTTGGGGGCCGGACCAAGAGTGTGGTGGTAATTCAATGGCCAGCAGCGTCTGGTGGTGGTGATTCGAAAGAAGGGGTGGAGGTTGGAGCTCTGGAACGGGCGTTGAAGGCGGTTATTGAGAATCGGGCTTTAGTGGGCTCTGGAATGGGCCGCTTCGTGTTGGGTCAGAAGCGGGCTTGGAATAGTTATGATTCCCCTGATGAGTTTTTGCTAACCAGAGATGCTAGCAAGTAA 789 0.5615 MLPFGGRFYGFESWLDHPHQHHSSPSDGFFVPEAPFKATDLLFDGAGRSSKLDNNRKSTEACKSHREAERRRRQRINAHLSTLRSLLPNTAKADKASLLAEVVKHVKRLKKEADDVARDPSKPDAEAEPWPFPGEADEATLSYCDGEPNLVKATLCCEDRPGLNRDLTHAIRSVRAKAVRAEMMTVGGRTKSVVVIQWPAASGGGDSKEGVEVGALERALKAVIENRALVGSGMGRFVLGQKRAWNSYDSPDEFLLTRDASK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1733 262 PANTHER OS09G0463900 PROTEIN 52 245 - -
Ahy7g1733 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 119 IPR036638 GO:0046983
Ahy7g1733 262 MobiDBLite consensus disorder prediction 47 72 - -
Ahy7g1733 262 Gene3D - 54 117 IPR036638 GO:0046983
Ahy7g1733 262 MobiDBLite consensus disorder prediction 50 72 - -
Ahy7g1733 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 60 109 IPR011598 GO:0046983
Ahy7g1733 262 PANTHER TRANSCRIPTION FACTOR BHLH30 52 245 IPR045847 GO:0003700|GO:0006355
Ahy7g1733 262 MobiDBLite consensus disorder prediction 112 132 - -
Ahy7g1733 262 Coils Coil 99 119 - -
Ahy7g1733 262 Pfam Helix-loop-helix DNA-binding domain 62 109 IPR011598 GO:0046983
Ahy7g1733 262 SMART finulus 66 115 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1733 Ahy-Chr7 63935333 63937796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1733 57 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 45.402 4.05e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy7g1733 HLH 9.40E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1733 - - aip:107608273 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1730 17 41566858 41569284 Ahy7g1733 7 63935333 63937796 hybridization