Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1730 ATGTTCTCGAAGCTTCATCAACAACCGCAACAGCAACAGCAACAGCAGCACGCCTTCCAACTCTCCCGAGAATGCCAAACCTCAGAAGACGATGACAGCAGGAACAGCGGTGGGCCCACTCTCGGCCCGGCCCAAAAGCCAAACGCAACAGACGACGCCACTATCGAAGTCATTAGGCGTCCCAGGGGCCGTCCACCTGGCTCCAAAAACAAGCCCAAGCCTCCTCTCGTAATAACACAGGAGCCCGAGCCCGCCATGAGCCCATACATTCTCGAAATCCCCAGTGGAAACGACGTCGTTGAATCTATAGCTAGCTTCACACGACGCAAGAACTCAGGCCTCTGCATCCTCTCCGGTTCTGGAACCGTTTCCAACGTCACTCTCCGTCAACCATCCAACGCCGCCTCCCCCGGCGCCACTGTTACGTTCCACGGCCGCTTCGAAATACTCTCGATCTCCGCTACTTTTGTCCCTCACGCGCCGCCGCCGCCGGTTCCAAGTTCGTTCTCCATCTCTCTAGCCGGACCTCAGGGCCAGATCGTCGGCGGACTCGTCGCCGGCAAGCTGATCGCCGCCGGGATGGTGTACGTGGTTGCGGCGTCGTTCAGCAAAGCGGCGTACCACAGGCTGCAATCGTCGGAGGAAGAGGTCGCTGGTGGAGGTGGAGGAGGAGAGGTGCAGTCACCGCCGGTTTCTGCTGCGACGGAGAGCGGGAGTGGTGGCGGCGGCGGAGGGGGACACGTGGCGATTGGAGATCAGTCCTGTGGAGTTGGAATCATGTACAGCGGTCACCTTCCTTCCGATGTGATTTGGGCTCCAACGGCAAGACCACCATTTTGA 840 0.5952 MFSKLHQQPQQQQQQQHAFQLSRECQTSEDDDSRNSGGPTLGPAQKPNATDDATIEVIRRPRGRPPGSKNKPKPPLVITQEPEPAMSPYILEIPSGNDVVESIASFTRRKNSGLCILSGSGTVSNVTLRQPSNAASPGATVTFHGRFEILSISATFVPHAPPPPVPSSFSISLAGPQGQIVGGLVAGKLIAAGMVYVVAASFSKAAYHRLQSSEEEVAGGGGGGEVQSPPVSAATESGSGGGGGGGHVAIGDQSCGVGIMYSGHLPSDVIWAPTARPPF* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1730 279 MobiDBLite consensus disorder prediction 215 247 - -
Ahy7g1730 279 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 203 IPR005175 -
Ahy7g1730 279 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 9 277 - -
Ahy7g1730 279 SUPERFAMILY AF0104/ALDC/Ptd012-like 85 216 - -
Ahy7g1730 279 PIRSF ESCAROLA 2 279 IPR014476 GO:0003680
Ahy7g1730 279 ProSiteProfiles PPC domain profile profile. 83 224 IPR005175 -
Ahy7g1730 279 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 9 277 IPR014476 GO:0003680
Ahy7g1730 279 Gene3D - 88 218 - -
Ahy7g1730 279 MobiDBLite consensus disorder prediction 1 23 - -
Ahy7g1730 279 CDD DUF296 88 202 IPR005175 -
Ahy7g1730 279 MobiDBLite consensus disorder prediction 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1730 Ahy-Chr7 63750959 63752354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1730 51 278 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 62.128 1.69e-90 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1730 - - gmx:100811053 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3025 17 131062838 131064527 Ahy7g1730 7 63750959 63752354 hybridization