Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1713 ATGGAATTTGACGAGCAAGAAGAGCAAGAGGAGGAACTGGGAATACCGGAGGCACCGCAGTCTCAAGCCACGCAAGCGAGTTACGACTCACTCGGAAACTCAGCGAAACTCACCGGGGATGGAACCGCCGCGTCAGGCTTTGGACGAAAAGGAGCAGCAGCGTCGTCGGTGAGGTACCGTGAATGTCAGAAGAACCACGCCGTCAGCTTCGGCGGCCACGCCGTAGACGGTTGCTGCGAGTTCATGGCCGCCGGAGAGGACGGCTCGCTGGAGGCCGTCATCTGCGCTGCCTGTAACTGCCACCGCAACTTTCACCGCAAAGAGATCGACGGCGACATAAGAGGTGGAAGCGGCGCCGGGACCTTACACCACCACCGTCCTCAACCTCCTCCGCCGCATCTCCACCAATTCTCCCCTTACTACCACCACCGCGGTCCGCCGTACCCGGCAGGGTACCTTCACCACCTTGCGACACCTCCGATGGCTCAGCACCGTCCTCTAGCACTTCCTGCAGCGGTTTCCGGCGGTGGACTAAGCAGAGATGAGGAGGACATGTCGAACCCTAGCAGCAGCGGTGGCGGCGGCGGCGGCGGTGGCTGTGGCGGAAGCGGTTCTTCAAAGAAAAGGTTCAGGACGAAGTTCACGCAGGAACAGAAGGATAAGATGCTTGCTTTCGCTGAACAAGTTGGATGGCGGATCCAGAAGCAAGATGAAGCCATGGTTGAACAGTTCTGTGCCGAAGCTTGCGTTAAGAGGAGCGTTCTCAAGGTTTGGATGCACAATAACAAGAACACTCTTGAAGTGTAG 807 0.5824 MEFDEQEEQEEELGIPEAPQSQATQASYDSLGNSAKLTGDGTAASGFGRKGAAASSVRYRECQKNHAVSFGGHAVDGCCEFMAAGEDGSLEAVICAACNCHRNFHRKEIDGDIRGGSGAGTLHHHRPQPPPPHLHQFSPYYHHRGPPYPAGYLHHLATPPMAQHRPLALPAAVSGGGLSRDEEDMSNPSSSGGGGGGGGCGGSGSSKKRFRTKFTQEQKDKMLAFAEQVGWRIQKQDEAMVEQFCAEACVKRSVLKVWMHNNKNTLEV* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1713 268 Pfam ZF-HD protein dimerisation region 57 109 IPR006456 -
Ahy7g1713 268 Gene3D - 195 267 - -
Ahy7g1713 268 MobiDBLite consensus disorder prediction 18 40 - -
Ahy7g1713 268 MobiDBLite consensus disorder prediction 172 209 - -
Ahy7g1713 268 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 39 266 - -
Ahy7g1713 268 SUPERFAMILY Homeodomain-like 194 265 IPR009057 -
Ahy7g1713 268 MobiDBLite consensus disorder prediction 1 48 - -
Ahy7g1713 268 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 39 266 - -
Ahy7g1713 268 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 59 108 IPR006456 -
Ahy7g1713 268 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 207 264 IPR006455 -
Ahy7g1713 268 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 58 109 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1713 Ahy-Chr7 62728224 62732264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1713 1 267 ZF-HD Transcription Factor Family AT4G24660 47.940 2.94e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Ahy7g1713 ZF-HD_dimer 8.00E-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1713 - - ahf:112703242 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3010 17 130672550 130674517 Ahy7g1713 7 62728224 62732264 hybridization
Ahy7g1713 7 62728224 62732264 Ahy17g3010 17 130672550 130674517 PCT
Ahy7g1713 7 62728224 62732264 Ahy8g0709 8 13887469 13889843 PCT
Ahy17g3010 17 130672550 130674517 Ahy7g1713 7 62728224 62732264 PCT
Ahy8g0709 8 13887469 13889843 Ahy7g1713 7 62728224 62732264 PCT