Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1710 ATGGCCTCCAATTCACACAGGGCGGCTCCTTTCTACGGCGTCGCTGCCCCTTTCCGGTCAAGAGATGGGCTTAGCACAAGGGCAGTATCGGGGACCGACGAGATCCAATTGCGAATTGATCCCTTCGACTTGGAGGACGAGATCACCGGTCTTCATACCCAAGTTAGAAGGTTGAAACATGTTGCAAACGAGATAGGCACAGAAGTAAAGTATCAAAAGGATTTTTTGGAACAAGTGCAAATGGGAATAATGAAGGCTCAAGTAGGGGTGAAGAACAATATGAGAAGATTGAACAAGGCCGTGATTAAAAGTGGCTCGAATCACATTCTTCATATCGTTACATTTGGTTTAGTTTTGTTTCTCATAGTATACCTTTGGTCCAAGATTTCCAGAAAATGA 399 0.4436 MASNSHRAAPFYGVAAPFRSRDGLSTRAVSGTDEIQLRIDPFDLEDEITGLHTQVRRLKHVANEIGTEVKYQKDFLEQVQMGIMKAQVGVKNNMRRLNKAVIKSGSNHILHIVTFGLVLFLIVYLWSKISRK* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1710 132 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 9 131 - -
Ahy7g1710 132 SUPERFAMILY SNARE fusion complex 43 99 - -
Ahy7g1710 132 Gene3D - 45 100 - -
Ahy7g1710 132 CDD SNARE_Qc 43 99 - -
Ahy7g1710 132 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 46 100 IPR000727 -
Ahy7g1710 132 PANTHER GOLGI SNARE BET1-RELATED 9 131 IPR039897 GO:0015031|GO:0030173
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1710 Ahy-Chr7 62095818 62098607 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1710 K08505 - gmx:100306642 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3004 17 130583291 130585398 Ahy7g1710 7 62095818 62098607 hybridization
Ahy7g1710 7 62095818 62098607 Ahy17g1771 17 45158810 45162788 PCT
Ahy7g1710 7 62095818 62098607 Ahy8g0703 8 13803343 13805477 PCT
Ahy17g1771 17 45158810 45162788 Ahy7g1710 7 62095818 62098607 PCT
Ahy8g0703 8 13803343 13805477 Ahy7g1710 7 62095818 62098607 PCT