Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1699 ATGCAGGTGGTAGTATTACCTTCATGTTCAGCTATGACCGACCTGATCGAGTGTCATCCACCTTCAAGATGCCATCAAACTATCCACCACCGCGTCCTCTGTCTTCTTCTATCTAAACTATCACTACATGTCATCGTAACTAATAATCTGTTTGTTCAAGATGGTGGATCCTATCCACCTCATTTTCTTTTTCTTTTTCTCCTTATCTTTCACACTCCGCTTGCAACGGCACAGCAGCAGGAGTACCCATTGCCTAAGGTAAGAGGTGACAAGACCATGGTCATTGTCCTCCTCGTCCTCGTGGCCGTCTTCTTCGCCCTAGGCCTCCTCTCCATCTACATTCGCCAATGCTCCGAACGTCGGCACCGTGACCAGCTCCACCCTGCTATCCTCTCTGCCACCTACGGTGGAGGCAACAGCGGGGGGCAGCATCATGGCCTTGGCATTGCGGTGGTGGACTCATTTCCATCCTTCATCTACTCCAACGTGAAGAGTCACAAGATCGGGCAGGGGGCGCTAGAATACGCCGTGTGCCTATGCGAGTTTCAAGATGAAGAAACGCTGCGTTTGATCCCACAATGCTGCCACGTGTTCCACTCCGACTGCATCGATGTCTGGTTCTCCTCCCACTCAACATGTCCAGTCTGCCGTGCAAACCTCACGCCAAAACCACCTGACACGTCATCACCACAATCCCTCGTTGTAAACATTTCGGATCAACCTGATACGAATCCAGTTAACAGTGAGCCAAATATCATTTCCCTGATCAATGATGGCGACCAGAACAATGCAATAATAACAGAGCCGAAGTCTCATCAGGAGATGAGAACTATTTTTAATTTTGATGAAGAGAATGGTTCGGTTCGGTCATTTTATCGTTTTAACTCGGCCGGTCATTTTACGGTTCGACCGGTAGAGAACTTTGAGCGGTTCACATTGAGGCTACCGGAAGATATGAGAGACCGGCTCGTGAATGTTAGTTCAGTTAACCGAACGGTTAGTTGGAGGGTAACATTTCAAACGGAGAGAAGCCAGAAGGAGGGTTATAGGACAAGGAGTGCAGGAAGCACAGAGCCACCATTTATTGGCATGACCAGATTTGAAAGGTTAGAGAAGGGTGAGAGCATTAAAGGAAATGAGGTTGAAGTAGATGGGGGAGAACGGTCTTTTGATCTTCTATTTCCCAAGGGCTCGAGGGATGAAAATTAG 1209 0.483 MQVVVLPSCSAMTDLIECHPPSRCHQTIHHRVLCLLLSKLSLHVIVTNNLFVQDGGSYPPHFLFLFLLIFHTPLATAQQQEYPLPKVRGDKTMVIVLLVLVAVFFALGLLSIYIRQCSERRHRDQLHPAILSATYGGGNSGGQHHGLGIAVVDSFPSFIYSNVKSHKIGQGALEYAVCLCEFQDEETLRLIPQCCHVFHSDCIDVWFSSHSTCPVCRANLTPKPPDTSSPQSLVVNISDQPDTNPVNSEPNIISLINDGDQNNAIITEPKSHQEMRTIFNFDEENGSVRSFYRFNSAGHFTVRPVENFERFTLRLPEDMRDRLVNVSSVNRTVSWRVTFQTERSQKEGYRTRSAGSTEPPFIGMTRFERLEKGESIKGNEVEVDGGERSFDLLFPKGSRDEN* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1699 402 SUPERFAMILY RING/U-box 176 227 - -
Ahy7g1699 402 CDD RING-H2_PA-TM-RING 176 217 - -
Ahy7g1699 402 PANTHER RING FINGER DOMAIN-CONTAINING 63 339 - -
Ahy7g1699 402 Pfam Ring finger domain 177 217 IPR001841 -
Ahy7g1699 402 PANTHER RING-H2 FINGER PROTEIN ATL11 63 339 - -
Ahy7g1699 402 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 223 IPR013083 -
Ahy7g1699 402 ProSiteProfiles Zinc finger RING-type profile. 177 217 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1699 Ahy-Chr7 61553609 61555422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1699 64 334 Rapid Response to Elicitors AT3G05200 36.364 4.12e-49 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1699 K10664 - gmx:100815982 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2989 17 130332608 130334867 Ahy7g1699 7 61553609 61555422 hybridization
Ahy7g1699 7 61553609 61555422 Ahy17g1793 17 46344747 46346288 PCT
Ahy7g1699 7 61553609 61555422 Ahy8g0694 8 13631931 13634119 PCT
Ahy17g1793 17 46344747 46346288 Ahy7g1699 7 61553609 61555422 PCT
Ahy8g0694 8 13631931 13634119 Ahy7g1699 7 61553609 61555422 PCT