LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy7g1671	ATGGCAAGTGCTCCCACTCCACGAGAGGAGTTCGTATACATGGCAAAGCTAGCAGAGCAAGCTGAGCGCTACGAGGAGATGGTGGAGTACATGGAGAAGGTGTCAGCTGCCGCCACCGACGGCGAGGAGTTGTCGGTGGAGGAGCGGAACCTTCTCTCCGTCGCATACAAGAATGTGATCGGCGCTCGACGCGCGTCGTGGCGCATTATCTCCTCCATTGAGCAGAAGGAGGAGAGCAAAGGGAACACAGAACATGTGGCTACCATTAAGGAATACCGCTCCAAGATAGAGTCTGAGCTGGCCAGCATCTGTGATGGCATTCTCAAGCTTTTGGACTCTCGCCTTGTGCCTTCAGCAACCACCAGCGATTCCAAGGTCTTTTATTTTAAGATGAAAGGTGACTACCATCGATACCTTGCGGAGTTCAAGTCTGGTGCAGACCGCAAGGAGGCTGCGGAGAGCACCCTTGCCGCCTACCAATCCGCTCAGGATATTGCGAATGAGGAGTTGCCTCCAACCCATCCAATCAGGCTGGGTCTTGCTTTGAACTTCTCTGTCTTTTACTATGAGATTCTTAATTCTCCTGACAAAGCTTGTAGCCTTGCTAAACAGGCTTTTGACAAGGCAATTGCTGAGCTGGATACATTGGGAGAGGAATCATACAAAGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTTACCCTTTGGACTTCTGACACGCAGGATGAAGGTGCAGATGAAATTAAAGAAGCAGCACCAAAAAGTGAAGAACAACAATAG	786	0.4987	MASAPTPREEFVYMAKLAEQAERYEEMVEYMEKVSAAATDGEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNTEHVATIKEYRSKIESELASICDGILKLLDSRLVPSATTSDSKVFYFKMKGDYHRYLAEFKSGADRKEAAESTLAAYQSAQDIANEELPPTHPIRLGLALNFSVFYYEILNSPDKACSLAKQAFDKAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTQDEGADEIKEAAPKSEEQQ*	262

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy7g1671	261	Pfam	14-3-3 protein	14	239	IPR023410	-
	Ahy7g1671	261	ProSitePatterns	14-3-3 proteins signature 1.	49	59	IPR023409	-
	Ahy7g1671	261	MobiDBLite	consensus disorder prediction	242	261	-	-
	Ahy7g1671	261	PRINTS	14-3-3 protein zeta signature	185	211	IPR000308	-
	Ahy7g1671	261	PRINTS	14-3-3 protein zeta signature	43	72	IPR000308	-
	Ahy7g1671	261	PRINTS	14-3-3 protein zeta signature	123	145	IPR000308	-
	Ahy7g1671	261	PRINTS	14-3-3 protein zeta signature	92	116	IPR000308	-
	Ahy7g1671	261	PRINTS	14-3-3 protein zeta signature	158	184	IPR000308	-
	Ahy7g1671	261	PRINTS	14-3-3 protein zeta signature	212	241	IPR000308	-
	Ahy7g1671	261	MobiDBLite	consensus disorder prediction	244	261	-	-
	Ahy7g1671	261	Gene3D	-	2	252	IPR036815	-
	Ahy7g1671	261	ProSitePatterns	14-3-3 proteins signature 2.	221	240	IPR023409	-
	Ahy7g1671	261	SUPERFAMILY	14-3-3 protein	8	241	IPR036815	-
	Ahy7g1671	261	PIRSF	14-3-3	2	251	IPR000308	-
	Ahy7g1671	261	PANTHER	14-3-3 PROTEIN 6	6	259	-	-
	Ahy7g1671	261	SMART	1433_4	8	252	IPR023410	-
	Ahy7g1671	261	Coils	Coil	14	34	-	-
	Ahy7g1671	261	Coils	Coil	149	169	-	-
	Ahy7g1671	261	PANTHER	14-3-3 PROTEIN	6	259	IPR000308	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy7g1671	Ahy-Chr7	59732577	59735074	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy7g1671	1	261	14-3-3 family	AT1G78300	84.411	4.96e-162	447

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy7g1671	K06630		-	gmx:100794129	453.366