Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1649 ATGGGAAGGTCCCCATGCTGCGATGAAAACGGCCTAAAGAAAGGACCATGGACTCCTGAAGAAGATCAAAAGCTAGTCGATCATATTCAGAAACATGGCCATGGAAGTTGGAGAGCTCTTCCTAAGTTAGCAGGGCTTAATAGATGTGGAAAAAGCTGTAGACTAAGGTGGACTAACTATTTGAAGCCTGACATTAAGAGGGGGAAATTCTCCCAAGAAGAGGAGCAAACTATTCTGCATCTGCATTCCATTCTTGGAAATAAATGGTCAGCAATTGCAACTCATCTTCCAGGAAGGACAGACAATGAGATAAAAAATTTCTGGAACACTCATTTAAAGAAGAGGCTAATTCAGATGGGTTTCGATCCAATGACACATCAGCCAAGAACTGATCTTTTTTCAACATTGCCATATCTACTAGCTTTGGCCAGCATCACCGATTTTATGGATCATCATCAATCGTTTGATGAACATTCTCTAAGGCTCCAATTAGAGGCAGTTCAATTAGCAAAGATTCAACAACTTAATTACTTACTTCAATCCACTACTATTTCTACTACTACTACTACTACTACTACTACTAATAATAATTCCTTATTAAGCAACATTATTAGTAGTAGTATTAATACCAATAATAACTCCTATGACCAAAATAATAATTCCATCACAGACATGGAAGCTTTCAATTTATTAAATTCAATCACGAATAATAATGTCAAAGAAAATAACCCAGTTACCACATTTTCTCATGATGAGATTATTGTTGATTCTTCTTCCCAACCACTCCACCAATCAAGCAACATGCTATTACATCATTTATTAGACCCACAGCCACAAGTCTCTTTGACAAGTTCCCAATCAAGTTTGAATAGTACTAAGCTGGATCAAGGTATTACTACTAATAATAATAATAATAATAATAATGATTTGGAAGTTATGGGTAGTGAAGGCGATTATCACATGATTTCTCCATGGAACATCATAACATCTTTATCATCATCTTCGTCATCGTCATCATCTCCTGCATCTTCATCTGTTCCACTAAATGCAAGCAGCAGCAATACTTCTAGCTATGGTGGAACCTCCTCTTACTGGCCTGAACTTTTTTATGGGAATCCCATTATGCATGATGAGTTATACTAA 1143 0.3657 MGRSPCCDENGLKKGPWTPEEDQKLVDHIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLKPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKRLIQMGFDPMTHQPRTDLFSTLPYLLALASITDFMDHHQSFDEHSLRLQLEAVQLAKIQQLNYLLQSTTISTTTTTTTTTNNNSLLSNIISSSINTNNNSYDQNNNSITDMEAFNLLNSITNNNVKENNPVTTFSHDEIIVDSSSQPLHQSSNMLLHHLLDPQPQVSLTSSQSSLNSTKLDQGITTNNNNNNNNDLEVMGSEGDYHMISPWNIITSLSSSSSSSSSPASSSVPLNASSSNTSSYGGTSSYWPELFYGNPIMHDELY* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1649 380 MobiDBLite consensus disorder prediction 280 315 - -
Ahy7g1649 380 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy7g1649 380 CDD SANT 69 112 IPR001005 -
Ahy7g1649 380 MobiDBLite consensus disorder prediction 336 359 - -
Ahy7g1649 380 CDD SANT 16 61 IPR001005 -
Ahy7g1649 380 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy7g1649 380 Gene3D - 11 67 - -
Ahy7g1649 380 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Ahy7g1649 380 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy7g1649 380 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 261 - -
Ahy7g1649 380 MobiDBLite consensus disorder prediction 280 312 - -
Ahy7g1649 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy7g1649 380 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 261 - -
Ahy7g1649 380 SMART sant 13 63 IPR001005 -
Ahy7g1649 380 SMART sant 66 114 IPR001005 -
Ahy7g1649 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy7g1649 380 Gene3D - 69 116 - -
Ahy7g1649 380 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1649 Ahy-Chr7 58255356 58257242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1649 1 375 MYB Transcription Factor Family AT1G34670 48.379 6.22e-109 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy7g1649 Myb_DNA-binding 8.70E-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1649 K09422 - gmx:100782792 401.749