Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1638 ATGGCAGGGAAGAACAGGCAAAACAAGAAGATGGGAATGGGAAATGAATTTGGTTGTGGATTCATGGGTGGAATTATCCATCTTAAAAGCTATTGGTTGAAAAATTCTTCTGTTCATTCACTTCCCATGAAAGCTAGCAACATATATAATGCATCAAAGAAGTCTCAGAACAAAGAAGAACCAAAGGTTAGAACAAGGAGAAACTCCACTGACACCGTAATCACACAAAAGCTGAGTATCTCAGACCAAAAACCTTGCGCAAAAGGTACCCTTGTACTTCAAAGTAGAAGACTATCAGATGCTGCAAGAATCTCAACATCCACATCGGCATCAACGTCGACATTATCGAATGACGACAGCAAACTGCAGCTGGCAAAGATAAATGAGAGAAACAACAAGTCTCCGGCCACGGCGCAACTAGCCGGAAACTTGCTTGTAAATAATAACACTCCAAGAGCAAAGAGCCTCCGGGAGTGTGGGCCTAAGAGCAAAACAGAGTGGAACTCCTCGTCCGGAAAAGCTTCGATGGGTAACATAATGAGGAAGAACAGCTGCGGCGGCGATGAGTTTGCGAGAAACAAGAAGGTGGTGGACCCGGAGGTGTTGAAGAACATGGGAAACAATGCGTATAAGGGAGGAAGGTTTGAAGAGGCTGTGGCTTTGTATGACAGAGCAATTGCTTTGGATTCAAGTAAGGCAACTTATCATTGCAACAAGAGTGCTGCTTTGATTGGCTTAAGAAGATTTCAAGAAGCAGTTGCTGAGTGTGAGGAATCTGTTAGGTTGGAGCCTTCGTATACCAGAGCTCATAACCGTTTGGCAACAATATATTTCAGATTGGGAGAAGCAGAGAAAGCCCTCGATTGCAATCAGTTAACCCCAGATACTGATTCTGCACTGGCTTTCCAAACTCAGACTCTTCAGAACCACCTTAACAAATGCAATGAAGCTCGGAAATTTAATGAATGGGGTGTTGTACTAAAGGAAACACAGTCAGCAATCTCCTTAGGGGTTGATTCATCTCCACAGGTCTATGCTTTGCAAACTGAAGCCTTGTTGAAGCTCCTAAGATATCAAGAGGCACAAGTCACCTATGAGAAAATGCCAAAATTCTCACCTGATTGGTGCAACAAGATATTTGGCTTTGCTCGCAGTTCCTACCAGTTCATGATCGCCGCACAGGTTTACTTGGCAGCTGGCAGGTTTGAGGATGCCGTTGCGGCAGCTCAGAAAGCAGCTAACGTGGATCCAAGCAACAGAGAGGCGAATGCAATGTTAAGGAAGGCCAGAGCAGTAACATCAGCAAGAATGAGTGGAAACTTACTCTTCAAGGCATCGAAGTTTGTGGAAGCAAGCGCAGTGTACAACGAAGGACTAGATCATAATCCGCACAACTCAGTCCTGCTATGCAACAGAGCGGCGTGTCGTTCCAAGCTCGGCCAATTCGAGAAAGCTATTGAAGATTGCAATGCCGCACTCATAGTCCAGCCTTCCTACAGCAAAGCAAGGTTAAGGAGGGCAAATTGCAATGCCAAGTTGCAAAGATGGGAAGTTGCCATTCAAGACTATGAAATGCTATTAAGGGAGAAGCCAGGGGATGAGGAAGTAGCCAGGGAATTGTTTGAGGCTCAGCTACAACTTAAGATGCTCCGCGGCGAATTTATTGTAAACTTGAAATTTGGCGCGAATTTGGTGTTCATTTCAAACAATGATCAATTTAGACAATATGTAACTTCTCCTGGAATGGCTGTGGTACTATTTACCAACAGGGCAGCAAACAAACAAGTACTTCTAGTGTTGGAGCAAATTAGCAAGAGATTCCCATCAGTGAATTTCCTCAAGGTGGAGATTGAGGACCATCCCTACTTGGCAAAATCAGAAGCTGTGAACTCTATTCCAGCTTTCAAAATATACAAGAATGGATCAAGGGTAAAAGAAATTTCTGGAAAAAACCATGATTTATTAGAAAAATCAGTTCAATTGTATAGCGGCTGA 1995 0.4376 MAGKNRQNKKMGMGNEFGCGFMGGIIHLKSYWLKNSSVHSLPMKASNIYNASKKSQNKEEPKVRTRRNSTDTVITQKLSISDQKPCAKGTLVLQSRRLSDAARISTSTSASTSTLSNDDSKLQLAKINERNNKSPATAQLAGNLLVNNNTPRAKSLRECGPKSKTEWNSSSGKASMGNIMRKNSCGGDEFARNKKVVDPEVLKNMGNNAYKGGRFEEAVALYDRAIALDSSKATYHCNKSAALIGLRRFQEAVAECEESVRLEPSYTRAHNRLATIYFRLGEAEKALDCNQLTPDTDSALAFQTQTLQNHLNKCNEARKFNEWGVVLKETQSAISLGVDSSPQVYALQTEALLKLLRYQEAQVTYEKMPKFSPDWCNKIFGFARSSYQFMIAAQVYLAAGRFEDAVAAAQKAANVDPSNREANAMLRKARAVTSARMSGNLLFKASKFVEASAVYNEGLDHNPHNSVLLCNRAACRSKLGQFEKAIEDCNAALIVQPSYSKARLRRANCNAKLQRWEVAIQDYEMLLREKPGDEEVARELFEAQLQLKMLRGEFIVNLKFGANLVFISNNDQFRQYVTSPGMAVVLFTNRAANKQVLLVLEQISKRFPSVNFLKVEIEDHPYLAKSEAVNSIPAFKIYKNGSRVKEISGKNHDLLEKSVQLYSG* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1638 664 SUPERFAMILY Thioredoxin-like 532 658 IPR036249 -
Ahy7g1638 664 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 661 - -
Ahy7g1638 664 Pfam Tetratricopeptide repeat 392 465 - -
Ahy7g1638 664 Pfam Tetratricopeptide repeat 242 287 - -
Ahy7g1638 664 MobiDBLite consensus disorder prediction 152 178 - -
Ahy7g1638 664 Pfam Thioredoxin 569 657 IPR013766 -
Ahy7g1638 664 SMART tpr_5 500 533 IPR019734 GO:0005515
Ahy7g1638 664 SMART tpr_5 466 499 IPR019734 GO:0005515
Ahy7g1638 664 SMART tpr_5 386 419 IPR019734 GO:0005515
Ahy7g1638 664 SMART tpr_5 199 232 IPR019734 GO:0005515
Ahy7g1638 664 SMART tpr_5 432 465 IPR019734 GO:0005515
Ahy7g1638 664 SMART tpr_5 233 266 IPR019734 GO:0005515
Ahy7g1638 664 SMART tpr_5 267 300 IPR019734 GO:0005515
Ahy7g1638 664 Gene3D Glutaredoxin 559 663 - -
Ahy7g1638 664 Pfam TPR repeat 206 238 - -
Ahy7g1638 664 MobiDBLite consensus disorder prediction 49 71 - -
Ahy7g1638 664 CDD TRX_family 571 649 - -
Ahy7g1638 664 Pfam Tetratricopeptide repeat 468 499 IPR001440 GO:0005515
Ahy7g1638 664 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 661 IPR044534 -
Ahy7g1638 664 MobiDBLite consensus disorder prediction 162 178 - -
Ahy7g1638 664 SUPERFAMILY TPR-like 199 422 IPR011990 GO:0005515
Ahy7g1638 664 ProSiteProfiles TPR repeat profile. 199 232 IPR019734 GO:0005515
Ahy7g1638 664 SUPERFAMILY TPR-like 437 548 IPR011990 GO:0005515
Ahy7g1638 664 ProSiteProfiles TPR repeat profile. 386 419 IPR019734 GO:0005515
Ahy7g1638 664 Gene3D Tetratricopeptide repeat domain 197 551 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1638 Ahy-Chr7 57284707 57289622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1638 200 431 U-box Gene Family AT3G07370 23.881 1.62e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1638 K09527 - gmx:100782846 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2941 17 129393057 129396624 Ahy7g1638 7 57284707 57289622 hybridization
Ahy7g1638 7 57284707 57289622 Ahy17g1857 17 56434766 56439801 PCT
Ahy7g1638 7 57284707 57289622 Ahy8g0646 8 12770165 12773650 PCT
Ahy17g1857 17 56434766 56439801 Ahy7g1638 7 57284707 57289622 PCT
Ahy8g0646 8 12770165 12773650 Ahy7g1638 7 57284707 57289622 PCT