Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1636 ATGGCCTTGTTTGGTGGGTTATTGGGTCAATACCAGAAGAGAAGGCTTCTCTTCACTGTAGAAGAAAGCAATAATAATAAAGGAGGCAATAACAAAGTTAACCCCTGGCTTGAATCAATGAGAGCTTCTTCTCCTACACGAATCACACCCAACAACAATAACAACCAAGACGATAGCAACAACAACCCCTCTTGGATCGTTGGTCATCCATCTGCGCTGAAGATGTTTGATGAGATAATATGGAACTCGAAAGGGAAGCAAGTTGTTGTGTTTCTTGATTACGATGGAACTCTTTCTCCAATTGTTGCAGATCCAGAGAAAGCATTCATGACTAAAAAGATGAGAGCAATACTAAAGGACATAGCAAGACTATTTCCCACTGCCATAGTAACCGGAAGATGTATTGACAAGGTATACGATTTTGTAAGATTGGGAGAAGTGTACTATGCTGGAAGTCACGGTATGGACATCAAAGGACCAACAAAAAGCCGCAATCATCAGAAAGGTAATAATAATGAAGCATTAGTGCTCTTCCAACCTGCGAGTCAATTCTTGCCCATGATCAACGAGGTGTACAAGATCTTGGTAGAAAAAATGAAAGCTATTCCAGGGGCTAAAGTAGAAAACAACAAGTTTTGTCTGTCCGTGCACTTTCGATGTGTTGAAGAAAAGTGCTGGTCAGCCTTGGCGGAACAAGTTAATTCAGTGCTCAAGGAGTACCCAAAACTTAAGTTAACACACGGGAGAAAAGTGATTGAGATTCGTCCAACTATAAAATGGGACAAAGGCAAGGCTATTGAATTCTTGTTAGAGTCACTAGGCTATGCAAATTCTACCAGCGTATTTCCCATCTATATTGGTGATGATAGAACTGATGAGGATGCTTTTAAGGTTCTACGTAGTAAGGGCCAAGGAATTGGGATTCTTGTTTCTCAAATTCAAAAAGAAACTAAGGCTATCTACACTTTGCATGATCCTTTAGAGGTTGGACAATTTTTAAGGCGTTTGGCAGATTGGAAAAAAAAACAAGTTCTAGCCATACACCCACCACAAATTGTAGATTTGTAG 1068 0.4007 MALFGGLLGQYQKRRLLFTVEESNNNKGGNNKVNPWLESMRASSPTRITPNNNNNQDDSNNNPSWIVGHPSALKMFDEIIWNSKGKQVVVFLDYDGTLSPIVADPEKAFMTKKMRAILKDIARLFPTAIVTGRCIDKVYDFVRLGEVYYAGSHGMDIKGPTKSRNHQKGNNNEALVLFQPASQFLPMINEVYKILVEKMKAIPGAKVENNKFCLSVHFRCVEEKCWSALAEQVNSVLKEYPKLKLTHGRKVIEIRPTIKWDKGKAIEFLLESLGYANSTSVFPIYIGDDRTDEDAFKVLRSKGQGIGILVSQIQKETKAIYTLHDPLEVGQFLRRLADWKKKQVLAIHPPQIVDL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1636 355 Gene3D - 90 323 IPR023214 -
Ahy7g1636 355 CDD HAD_TPP 89 330 - -
Ahy7g1636 355 Pfam Trehalose-phosphatase 91 325 IPR003337 GO:0003824|GO:0005992
Ahy7g1636 355 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 342 - -
Ahy7g1636 355 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 90 300 IPR006379 -
Ahy7g1636 355 MobiDBLite consensus disorder prediction 43 64 - -
Ahy7g1636 355 Gene3D - 170 257 - -
Ahy7g1636 355 TIGRFAM T6PP: trehalose-phosphatase 85 337 IPR003337 GO:0003824|GO:0005992
Ahy7g1636 355 SUPERFAMILY HAD-like 89 340 IPR036412 -
Ahy7g1636 355 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 342 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1636 Ahy-Chr7 56871779 56875755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1636 84 338 Trehalose Biosynthesis Gene Families AT1G70290 26.568 8.07e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1636 K01087 - gmx:100785139 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2939 17 129341223 129343458 Ahy7g1636 7 56871779 56875755 hybridization
Ahy7g1636 7 56871779 56875755 Ahy17g1859 17 57259955 57263389 PCT
Ahy7g1636 7 56871779 56875755 Ahy8g0644 8 12717526 12719813 PCT
Ahy17g1859 17 57259955 57263389 Ahy7g1636 7 56871779 56875755 PCT
Ahy8g0644 8 12717526 12719813 Ahy7g1636 7 56871779 56875755 PCT