Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1630 ATGGCTACTTCATTCAACATGATTAAGGATCTTGATATTGCTGTTGCTAATCAAGTTTGGCGTATCAAAGTGCGTGTCATCAAAATATGGTCTATTAATTTAGGCAAAGAGAAGTTCAGGAGACCTAACTTAGAGATGGTTGTTATGGATGAATTAGGTGATCGGATACAATGTTCTGTAAGGAATCCTTTGAGGAGATTATTTGAGCAGGAGTTAGTTGAGGGCAATGTGTACTCTGTTGCTAACTTCTCTATTGAACTTAATGATCAAAAGTACAAGCCAACCAATCATACTCTGCGTGTGTTCTTTAAAAGGGAATCTCAGATTCGTGTGTTAGTCGATATTAATTTCCCAAACAATATTTTTCACTTTGTGCCTAATGAAATGATACTTAATCATGATAATCCTCAGTCTCACTTGATAGATGTTATTGGGTTGTTGACTGGAAAGGGTGATATAATAAAGTTCAGTAAGAATGGAAAGAAGTCCATATACATGGTTATTGAGCTTGATGACATGCAATCTAAGGGTAAGATAAGGTGTACATTGTGGGAGGAGTTTGCTACTCAACTGGTGAAGCACATGGAGCAGTACCCTAATACTGAGTTCATTATTATTGTGCAGTTTGCCAAATTTAACCTGTTCAAGGGTATACATGAACCATGGGCATATCTAATACAAACTACAACTCTACCTTATACATTAGCGCTGATCTTAAAGAAGTTTATCATGGGTAATGACAAGCCATCTAACCAGCTTTCTCAAATTGCATCTGATTCATTGATTTTCCTTGAGCAAGATCTTATTAACCATACTCCTTACAAGTTTATAAGTGAACTTAAGGAGAGCACTGAGGGTGGAATATTTGTTACCATTGGAACTGTGATTTCTATTGACACTAGACTAGGTTGGTGGTACAAAGGGTGCAAGATGTGTTTTCATTCACTTAAAGAAGATGAGAATTCATATTATTGCCATGAATGTGATATTTATCCTAATACTCATGTTCCTCGTTTCTGCATTCAAATGAGAGTATCAGATGAGACAGACTCTGCTTCATTTATTGTTTATGACAAGAAAGCCTCCAAATTTCTTGAGATATCTGCTTCTGAGCTTCGTTTGAGACAGATATCAAAGGGTTGCGGCAAGGATGAATTTTCCGTTGAGATTAATTCATTTAGGGGTAAGAAGTTTCTATTCAAGATTTCTGTGAAGCTTGATGATATCAATGCTTTCCAGCCATGCAAGATTACTAACACCCCAATCGAAAATACTGAGTTGCAGAGTTTGCAAACTGATTCTACTGATAATTCTAAGGAGATTAGTTCACAGTCTTGCGAAATTATTTCTCTTGATGACAATGATGACTTTGTAACTCCTAAGAGAGGTATGATAGCTAGTGTAACGGCAAAAAATTTGCTGGACATTTTCCCGGATAATGCCACTACTTCATCATCCAAATGCCGGAAGCTCTCCAAGGAATCTGATTGTAGCTTTGTCAAAGAGCATGTTGATTAA 1518 0.3669 MATSFNMIKDLDIAVANQVWRIKVRVIKIWSINLGKEKFRRPNLEMVVMDELGDRIQCSVRNPLRRLFEQELVEGNVYSVANFSIELNDQKYKPTNHTLRVFFKRESQIRVLVDINFPNNIFHFVPNEMILNHDNPQSHLIDVIGLLTGKGDIIKFSKNGKKSIYMVIELDDMQSKGKIRCTLWEEFATQLVKHMEQYPNTEFIIIVQFAKFNLFKGIHEPWAYLIQTTTLPYTLALILKKFIMGNDKPSNQLSQIASDSLIFLEQDLINHTPYKFISELKESTEGGIFVTIGTVISIDTRLGWWYKGCKMCFHSLKEDENSYYCHECDIYPNTHVPRFCIQMRVSDETDSASFIVYDKKASKFLEISASELRLRQISKGCGKDEFSVEINSFRGKKFLFKISVKLDDINAFQPCKITNTPIENTELQSLQTDSTDNSKEISSQSCEIISLDDNDDFVTPKRGMIASVTAKNLLDIFPDNATTSSSKCRKLSKESDCSFVKEHVD* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1630 505 SUPERFAMILY Nucleic acid-binding proteins 136 219 IPR012340 -
Ahy7g1630 505 PANTHER BNAC01G35430D PROTEIN 293 410 - -
Ahy7g1630 505 SUPERFAMILY Nucleic acid-binding proteins 4 116 IPR012340 -
Ahy7g1630 505 CDD RPA1_DBD_B_like 142 217 - -
Ahy7g1630 505 PANTHER REPLICATION FACTOR A 1, RFA1 293 410 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy7g1630 505 Pfam Domain of unknown function DUF223 45 132 IPR003871 -
Ahy7g1630 505 Gene3D - 267 441 IPR012340 -
Ahy7g1630 505 PANTHER BNAC01G35430D PROTEIN 23 170 - -
Ahy7g1630 505 CDD RPA1_DBD_A_like 21 109 - -
Ahy7g1630 505 CDD RPA1_DBD_C 277 410 IPR013955 -
Ahy7g1630 505 Gene3D - 115 234 IPR012340 -
Ahy7g1630 505 PANTHER REPLICATION FACTOR A 1, RFA1 23 170 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy7g1630 505 SUPERFAMILY Nucleic acid-binding proteins 272 416 IPR012340 -
Ahy7g1630 505 Gene3D - 7 114 IPR012340 -
Ahy7g1630 505 Pfam Replication factor-A C terminal domain 290 427 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1630 Ahy-Chr7 56396244 56398806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1630 20 418 Core DNA Replication Machinery Family AT5G08020 22.512 1.65e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1630 - - adu:107490971 909.057