Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1610 ATGTCTCACAACAATCACATAACCACCGATTCCCCGCTATCTCGTCGCATAGTTCGTTCCTTCCTGCAATTCCTCAACTCTGTTGAACCAGGGCCTGGGGTTGATGCCGAAGGGATTGAGGTTGCTAGGGAGTGTTTGGCAGAGGCCTTTAAGCTAAACTCTTCTGGTGTAGATGGTGATCCGCAATCTGATTCCTTGATTGACATGTTCAAGAGCCTTGAAGCAAGAAAGCAGCGTGAAACTATCAAGTCAGACCCTAGTCCTATGGATGCTTCTAGTTCATTCTCTGACCATAATCCATCATCCTTTGCTCAAAATCATATGAAGGATCAAGATTGGACACAGGGCACTGACATTTTTGCAGCATCCAAAGATGAACTCTGTGGAAAATTTTTTGCATCTCTGGAGAAAAATCACTATTTTAGGGTGAATCACGATGGAACTGATGACCCAATGCAACTAGAGAAAGCATCTTGTTTATTTGATAATGCTTTTAAGGAGATGGAAAAATCTGGGTCCCCAGTATTAAATCTGAAGAATTTGGCTGAATCACTGAAATCACTAGGTAACAAGGCAATGCAATCCAAGCAATACCATGATGCAATTGAGTTGTATAATTGTGCAATTGCAGTGCATGAAAAAAGTGCTGTTTATTACTGCAACAGGGCAGCAGCTTACACTCAGCTTAAAAAATATGATGAAGCAATCCAAGATTGTCTTAGATCTATTGAGATTGATCCAAACTACAGCAAGGCTTACAGTCGTTTGGGGTTAGTATACTATGCTCAAGGAAACTACAGCTTTGCTATTGATAAAGGGTTCAGAAAAGCCTTGCTATTGGATCCAAATAACGAAGCTGTTAAAGAAAATATACGGGTGGCTGAGCATAAATTGCGAGAAGAGCAACACCATGCAAATCATAATCAGCTTAGTGTTATACTCTCAGACTACTATGCTTTTGTCCATTGTAATTCACAACCTACTGGTGCCACTGTTGGAAATTCAGCCTCTACATACTACACTTCACAAAGTTCAAGATCATCTTGGGAATTTCCGAACCAATCGACAAGAGGATCAAGAAGCCATGGAGTGCCACCTTTTCCATCAGTGCCATTTAACCCAAATGATATAGCAAGCATGTTCAGAGACATGGCTGCAAATGTCACAGGTTCGCACCATGGGTCGCACTCTCAGGAACGGCCAGTGGATGCCAATGCCACAAGTGCTAATGAACCGGAAATAAGAATTGGTGGCAATATTAATTTGAACTTTGATGAAATGTCTGATGATGTAACAGGAGCCTTTAGATCTATGATGGAGATGTTCTCTGGGAGTTCGTCTCAAGGGCAACGACAAGATCATATGAATGGAAGAGCAGCTCCAAACTAA 1389 0.4161 MSHNNHITTDSPLSRRIVRSFLQFLNSVEPGPGVDAEGIEVARECLAEAFKLNSSGVDGDPQSDSLIDMFKSLEARKQRETIKSDPSPMDASSSFSDHNPSSFAQNHMKDQDWTQGTDIFAASKDELCGKFFASLEKNHYFRVNHDGTDDPMQLEKASCLFDNAFKEMEKSGSPVLNLKNLAESLKSLGNKAMQSKQYHDAIELYNCAIAVHEKSAVYYCNRAAAYTQLKKYDEAIQDCLRSIEIDPNYSKAYSRLGLVYYAQGNYSFAIDKGFRKALLLDPNNEAVKENIRVAEHKLREEQHHANHNQLSVILSDYYAFVHCNSQPTGATVGNSASTYYTSQSSRSSWEFPNQSTRGSRSHGVPPFPSVPFNPNDIASMFRDMAANVTGSHHGSHSQERPVDANATSANEPEIRIGGNINLNFDEMSDDVTGAFRSMMEMFSGSSSQGQRQDHMNGRAAPN* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1610 462 Gene3D Tetratricopeptide repeat domain 177 313 IPR011990 GO:0005515
Ahy7g1610 462 MobiDBLite consensus disorder prediction 343 362 - -
Ahy7g1610 462 MobiDBLite consensus disorder prediction 78 101 - -
Ahy7g1610 462 PANTHER LD24721P 10 459 - -
Ahy7g1610 462 Pfam Tetratricopeptide repeat 216 249 IPR001440 GO:0005515
Ahy7g1610 462 ProSiteProfiles TPR repeat profile. 182 215 IPR019734 GO:0005515
Ahy7g1610 462 PANTHER LD24721P 10 459 - -
Ahy7g1610 462 MobiDBLite consensus disorder prediction 390 405 - -
Ahy7g1610 462 MobiDBLite consensus disorder prediction 388 409 - -
Ahy7g1610 462 ProSiteProfiles TPR repeat profile. 216 249 IPR019734 GO:0005515
Ahy7g1610 462 SUPERFAMILY TPR-like 181 295 IPR011990 GO:0005515
Ahy7g1610 462 MobiDBLite consensus disorder prediction 343 369 - -
Ahy7g1610 462 MobiDBLite consensus disorder prediction 85 101 - -
Ahy7g1610 462 Gene3D Immunoglobulin FC, subunit C 1 76 - -
Ahy7g1610 462 MobiDBLite consensus disorder prediction 442 462 - -
Ahy7g1610 462 Coils Coil 284 304 - -
Ahy7g1610 462 ProSiteProfiles TPR repeat profile. 250 284 IPR019734 GO:0005515
Ahy7g1610 462 SMART tpr_5 216 249 IPR019734 GO:0005515
Ahy7g1610 462 SMART tpr_5 250 284 IPR019734 GO:0005515
Ahy7g1610 462 SMART tpr_5 182 215 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1610 Ahy-Chr7 55516397 55527122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1610 181 278 U-box Gene Family AT3G07370 29.592 3.11e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1610 K16365 - gmx:100775346 568.54