Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1600 ATGGCTTCCGCAGAAATTGAGTACCGTTGCTTCGTTGGTGGGCTTGCCTGGGCCACCGACAACGAAGCCCTCGAGAAAGCCTTCTCTTCCTTTGGCGAGATCGTCGAATCGAAGGTTATCAATGATCGTGAGACTGGAAGGTCGAGGGGTTTCGGATTTGTAACCTTCGCCACAGAGCAGGCCATGAGGGATGCCATCGAGGGGATGAATGGCCAGAACCTTGATGGCCGTAACATCACTGTCAACGAGGCGCAGTCCCGCGGTCGGGGCGGTGGCGGCGGTGGCGGTTACGGTAGCGGTGGCGGCGGTGGTTATGGTGGTGGTGGTGGTTACAGCCGTGGAGGAGGAGGAGGAGGAGGTGGATATGGAGGCCGCCGTGAAGGCGGAGGTGGTTACAACCGCGGCGGAGGTGGTGGAGGCTACGGTGGTAACGGTGGTAATGGTGGAGGTGGCTATGGAGGAGGTGGTTACGGTGGTGGGCGGGACCGTGGGTACGGAGACGGTGGATCTCGTTACTCAAAGGGGGGTGGTGCTTCTGATGGAAATTGGAGGAATTAG 558 0.595 MASAEIEYRCFVGGLAWATDNEALEKAFSSFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVNEAQSRGRGGGGGGGYGSGGGGGYGGGGGYSRGGGGGGGGYGGRREGGGGYNRGGGGGGYGGNGGNGGGGYGGGGYGGGRDRGYGDGGSRYSKGGGASDGNWRN* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1600 185 SUPERFAMILY RNA-binding domain, RBD 9 118 IPR035979 GO:0003676
Ahy7g1600 185 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Ahy7g1600 185 MobiDBLite consensus disorder prediction 151 185 - -
Ahy7g1600 185 Gene3D - 2 123 IPR012677 -
Ahy7g1600 185 PANTHER GEO13361P1-RELATED 1 135 - -
Ahy7g1600 185 SMART rrm1_1 9 82 IPR000504 GO:0003723
Ahy7g1600 185 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Ahy7g1600 185 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1600 Ahy-Chr7 55192814 55194084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1600 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 32.911 7.59e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1600 - K13195 gmx:100777821 166.777