Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1576 ATGCCAACGGCAACAAACAGTATTGAAAAAGAAGAAGAAGAAACAGGGATAAAGGGGGATCAAAGTTCAACGAAGTGCCAAGACTGTGGGAACCAAGCGAAGAAGGAGTGTTCATATTGGAGGTGCAGAACATGCTGCAAGAACAAAGGATTCCATTGTCAAACCCATATCAAGAGCACTTGGGTCCCCGTTGACCGAAGGCGCCTCAGGAAAGTAAATAACCACTTTCAGTTGTACCACCCACATATCTCCAAAAAGCACAAGCACTTCTACTCACCATCACCAGGTGTAGAGGACAAGTTAAAGTTGCCATCTGCTACGAATTCCATGGCTATATTTCGGCGCGTTGAGGTTAGGTCAATGGATCATGCGGTTAACGAAATTGGCTATCAAACATGTGTCAACATTGGAGGACATGTATTTAGTGGTCTTCTATATGATCATGGCCCTGCTGCTGTTGCTGCTGCTCCTTTTCTTGATCATCATCATCAACAGAATCTCAATCATGGTGCAAGTATGGGTCCAGTTGATGATGTTGATGAACCTTTCTTGCCTCCACCACCACTTTCAGACCCGCTACGTACGCCCTACTTCTCATTTCCAAAACCATAG 612 0.4493 MPTATNSIEKEEEETGIKGDQSSTKCQDCGNQAKKECSYWRCRTCCKNKGFHCQTHIKSTWVPVDRRRLRKVNNHFQLYHPHISKKHKHFYSPSPGVEDKLKLPSATNSMAIFRRVEVRSMDHAVNEIGYQTCVNIGGHVFSGLLYDHGPAAVAAAPFLDHHHQQNLNHGASMGPVDDVDEPFLPPPPLSDPLRTPYFSFPKP* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1576 203 Pfam Domain of unknown function (DUF702) 23 151 - -
Ahy7g1576 203 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 19 154 IPR007818 GO:0003700|GO:0006355
Ahy7g1576 203 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 25 67 IPR006510 -
Ahy7g1576 203 PANTHER BNAC01G23660D PROTEIN 19 154 - -
Ahy7g1576 203 MobiDBLite consensus disorder prediction 180 194 - -
Ahy7g1576 203 MobiDBLite consensus disorder prediction 165 203 - -
Ahy7g1576 203 MobiDBLite consensus disorder prediction 1 29 - -
Ahy7g1576 203 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 103 150 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1576 Ahy-Chr7 53614790 53616545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1576 25 199 C2H2 Transcription Factor Family AT2G21400 41.989 3.45e-39 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Ahy7g1576 DUF702 2.30E-40 No_clan