Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1575 ATGGACCCTAATGCCAAGTCGCCCATAATTGTTTTGTCGCCATTCCCCTTTCCCTTTATTAGCTCCAATACCAATCTCAATTGTACAAACAGACAAGCAACAGCGTTGGATAGAGAGATGAAGATCCAATGTGATGCGTGTGACAAAGACGAGGCATCTCTATTCTGTCCTGCAGATGAAGCCGCTCTCTGCCATGCCTGTGACCTTACAATCCACCATGCTAACAAGCTCGCAATCAAGCACACGCGCTTCACTCTCCACCAGCCTTCCTCCAAAGACATCCCTCGCTGCGATATCTGCCAAGAAAGGCGTGCATATCTGTTTTGCAAAGAAGACAGAGCAATACTTTGCAGAGAATGCGATGTTCCTATCCACAAAGCCAACGAACACACGCAGAACCATAGCAGGTTCCTTCTCACTGGTGTGAAGCTCTCTGGTTCCTCTCTCGACACGGCTTCATCATCATCAGTCACCAGCTCAACTGAGGCAAGAAGCTCCCGTTCAAGAATGAAGAGACCCACTGCTTTCAATAATGAGCACAATATGTCTGCGGCTACTACTAGTAATAGTGACACCGGTTCGGCTTCCTCAAGCAGCATATCCAAATTCTTGATTGAAACCATTCCCGGTTACTGCTTCGAAGACCTTCTCGATGCTTCCTTTCCACATAATAATGGTTTCTGTAAGAATCAACATTTAATGTCAGTGACAATATGTGGTTATTATTTTCAACTTGGATTGTTTCCCAGATCAGTTCTGTAG 762 0.4554 MDPNAKSPIIVLSPFPFPFISSNTNLNCTNRQATALDREMKIQCDACDKDEASLFCPADEAALCHACDLTIHHANKLAIKHTRFTLHQPSSKDIPRCDICQERRAYLFCKEDRAILCRECDVPIHKANEHTQNHSRFLLTGVKLSGSSLDTASSSSVTSSTEARSSRSRMKRPTAFNNEHNMSAATTSNSDTGSASSSSISKFLIETIPGYCFEDLLDASFPHNNGFCKNQHLMSVTICGYYFQLGLFPRSVL* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1575 253 ProSiteProfiles Zinc finger B-box type profile. 92 139 IPR000315 GO:0008270
Ahy7g1575 253 ProSiteProfiles Zinc finger B-box type profile. 39 86 IPR000315 GO:0008270
Ahy7g1575 253 CDD Bbox1_BBX-like 97 139 - -
Ahy7g1575 253 PANTHER B-BOX ZINC FINGER PROTEIN 22 40 233 - -
Ahy7g1575 253 PANTHER B-BOX ZINC FINGER PROTEIN 20 40 233 - -
Ahy7g1575 253 Gene3D Classic Zinc Finger 40 136 - -
Ahy7g1575 253 CDD Bbox1_BBX-like 44 86 - -
Ahy7g1575 253 Pfam B-box zinc finger 42 83 IPR000315 GO:0008270
Ahy7g1575 253 Pfam B-box zinc finger 95 131 IPR000315 GO:0008270
Ahy7g1575 253 MobiDBLite consensus disorder prediction 147 195 - -
Ahy7g1575 253 SMART bboxneu5 39 86 IPR000315 GO:0008270
Ahy7g1575 253 SMART bboxneu5 92 139 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1575 Ahy-Chr7 53404019 53405624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1575 40 229 C2C2-CO-like Transcription Factor Family AT1G75540 46.411 4.03e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Ahy7g1575 zf-B_box 8.30E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1575 - - adu:107458960 467.618