Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1567 ATGGATGCTGAAGACGAGGAAGCTCAACACCTACAACACTCTTATCCACTCCCATACCTCTCTACCACTTCACCACAATGCCACAGCACTGGAGTGGAGCCGGTTGATGCGGCCACCACCGCCGATAATAGAGAAACTCTTGTTGGAGAAGCGGAACAGGCGGCGGTTGCAGCCAATTCGGGCGAAGCGGTTGAAGAGGCGGTGGAGGAGACAGAGATTGGGGATTCGGGAAACGCAGGAGAAGGAGAAATGCAAGTGGTGGAAGATAAGGTTGTTGGCCCTGAGGTTGTAGTTAAGGGTGATGATGTGGAGAATGGAGAGGGCCAACAAGAAGAGGATGAGATTATGGTGGAGGCAACCGGCGTGGCGAAGATGGAAAAGGAGGAAGCTCCGTTGGTAGATGAGCACGAAATCAGGGATGGTGAGGATAACGTGGTGGAGCAGACGGAGGTACCAAATGAAGCTGCTTCCGTGGTAGAAAGAGAACAAGGGCAAGAAAAAGAAGATGCAGAAAAAGAACAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGGTGGGGAGCAAGAAGCTGATGCTGCTAGCGGTATGGCAAATGAAGCTGCTTTATTGGAAGAAGACGAGCAAGTACTAGGACAGCAGCACGAGAATGCAGGCGCCGATGTTGTTGTTGGTGGTGTAGCTAATGAATTCATCGAAGTGCACGAAGAAGGACAACAACAACAACAACAAGAGGAACAAGAGGATGCTGATGTTGGTGGTGGCTTGTTAAATGAAGCTGCTTTCATGGAAGAGCAAGAAGAAGCAGAGAAACAAGGAGAAGATGAAGAAGAAGAACAAGCTGCTGCCAGTGATGATATAGCAAATGAAGCTGCTTTGACAGTAGATCAGGAAGAAGAACAAGCCGATACTGGTGGTGATATGACAAATGAAGCTGCTTTCACGGATGAACATGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGATGGCGGTGGCAGTGTTGGGCGCATGGGAGAAGAGACAGAGCCCACTCAAGGGACAGAAGAAACGGAGGAGCAGAGTAGAAGTGTGAGTGGTGGGAAGAGGAAGCGCGGAAGTGGGAAAAATTCAAAGTCCACAGGGAGAGCCCCATCAAGGAAAAAGATGGAAGAGGATGTTTGTTTCATTTGCTTCGACGGGGGTGAGCTTGTTCTTTGTGACCGCAGGGGGTGCCCAAAGGCTTACCATCCTTCTTGCGTTAATCGTGATGAGGCCTTCTTCCGATCCAAGGGTAAATGGAATTGTGGATGGCATATTTGCAGCAACTGTGAGAAGAATGCTTACTACATGTGTTATACATGTACGTTCTCTTTGTGCAAGGGATGCATCAAAGATGCTGTTATCTTATGTGTTAGGGGAAACAAGGGCTTTTGCGAGACATGCATGAGAACTGTAATGTTGATTGAACAGAACAATCATGAAAACATGGGACAAGTGGATTTTGATGACAGAAGCAGCTGGGAGTATCTCTTTAAGGACTATTACTTAGATCTAAAAGAAAAGCTATCCCTGACATTCGATGAACTCACACAAGCTAAAAATCCTTGGAAGGGATCTGATAGGCTTCCTTCTAAAGAGGAATCAGCAGATGAACTTTTCGATGCCAATAATGATAGAGGATCTGATTCAGATAGCTCATATGAGAATGTAGATTTGAGTCGTTCCAAAAGAAGAAAGGGCAAGAAGCGGACAAAGTCCCGTTCCAGGGAAGGGACTTCATATGCTTCTGTGGATGGAGCATCTGCAGATGAAACCTCTGAGTGGGCTTCAAAAGAACTTTTGGAGTTTGTCATGCACATGAGAAATGGAGACAGATCCATTTTGTCACAGTTTGATGTGCAGGCTCTTCTGTTAGAGTATATTAAAAGAAATAAACTTAGAGATCCTCGTAGAAAAAGTCAAATCATTTGTGATACAAGGCTTCAAAATTTGTTTGGTAAACCAAGAGTGGGACATTTTGAAATGTTAAAGCTTCTTGAATCCCATTTCCTTCTAAAAGAAGATTCTCAAACTGATGATATGCAGGGAAGTGTTCTTGATACTGAAATTAGTCATTTGGAAGGTGATGGCAACTCTGATTCATATGTGAAAGCTGGCAAAGATAAGAGACGTAAAACTCGCAAAAAAGGTGATGAAAGAGGACTTCAAACTAATGTGGATGATTATGCTGCTATTGATAATCATAATGTTAATTTAATATATCTCCGACGTAATTTGGTGGAAGAGCTACTTGAAGATACAGAAAAGTTTCATGATAGAGTTGTTGGCGCTTTTGTGAGAATAAGGATTTCGGGTAGTGGCCAGAAGCAAGACTTGTACAGGCTGGTTCAGGTTGTAGGGACTTGCAAAGCATCAGAACCATATAAAGTTGGTAAAAGGATGACAGATTTCTTGCTAGAAATCTTAAATTTAAACAAGACAGAGATTGTATCCATTGATATTATCTCAAATCAGGAGTTCACAGAGGATGAATGCAAGCGACTCCGCCAAAGCATAAAATGCGGGCTCATAAATCGTCTGACACTGGGTGACATTCAGGAAAAAGCTTTGGCACTTCAGGCAGTTAGAGTGAATGATTGGTTAGAAACAGAGATAGTGCGGTTAAGTCATCTCCGTGACAGAGCCAGTGAGAAGGGACGCAGAAAAGAGCTCAGAGAGTGTGTTGAGAAGTTGCAACTTCTGAAGACTCCCGAAGAACGACAACGCAGATTGGAGGAAATTCCAGAAATTCATGTGGATCCTAAAATGGATCCAAGTCATGAATCTGAAGAAGATGAAGATGAAATGGATGAAAAACGACAAGAAAACTACATGAGACCTAGAGGACCTGCTGCATTTGGAAGGAGGGGGAGAGAGATTATTTCTCCTAGGAGTGGTCCTATTTCGAGTGATTCCTGGAGTGCGACACGGAATTATTCTAATGTGAATCGTGAACTTAGTAGAAATCTGTCGAACAAGGGGTTTTCAAGCAAAGGCGATGATGTTTCTATTGCTAATGAAGTACTAAATGATGCTCAATTACCCCAGGGAAGGGATTGGGGTTCACAATCTAGTGGCCTGGAGAGGCAGAAGCTATCTTCAAGCTTTGAAAGTGGTACTAAAAGTAACCAGCTGTTATCAACACCTGATCATTTTTCTGCTGCTTTATCAGAAACTTCTGCAGTGTTGTCTTCTGTGGGAGCTGCTCTGCCAGCTATGAAAATAAATGAAAGTGAAAAAATGTGGCATTATCAGGATCCGTCTGGAAAAGTTCAGGGACCATTTTCTATGGTGCAGCTACGCAAATGGAGTAACACAGGGTACTTTCCTGCTGATTTGAGGATTTGGAAAGCCAGTGACAAGCAAGATCAGTCGATGCTCTTAACCGATGCCTTAGCAGGAAAATTTCCTACTGAACCATCAATGCTGGATAAAACTCCTGCTAAGGCTCAATCTGTGATTGATCCACATTACTCATCTTCATACTCTGGCAAGTCTCATTTGGCGGTACAAGCTATGGAAGGTCAAGCTGGAGGAAGACCATCATTTGATCATAATAGTGGATCACATAATCCTCTTGGTTCTCCTGGACAAAATGCTGGAGGAAGTTGGAGATCTAAAGATACCATGAATTCTTTAGCAAGTCGACCTTCATTGGCAGTTGAAGTTCCCAAGAATCTGGCAAATGGTTGGGGTTCTGATGCTGGACTCGGAAATGAAGCAACAAATCTTCCTTCACCTACACCCCAGACTGCTTCAGGTGGGACCAAGATGCAGGCTTTTGAAAATAAATGGTCTCCAACTCCAACCCCTGTCCTATTGGCTGGCTCTCTCTTAGGAAATTCACTCCCTGTTGGGCCTGAAAGTCGTTCAAGTTCACAACCTGGAATGATATCAGCTTCTAAATCAGATAATAATCAAGTACATGTTCATGCAGCATTACCTGCGATTGCTTCAGGTGTTGACATTCAGACAGCAGGTGTACACTTGCAAAGTCAGAGTGTCAGTAACCATACCTCCCGTGCCGAAGGCCATCAAGGGTGGGGCTCCGGTACGGCTCCAAAGCCTGAAGTACAGACGTGGGGAGGTGCTCAACCTCAAAGGATAGAACCAAATAATCCAGTTACTATGCCTGCACAGCCAGCTTCCCATGGTCACTGGGTTGATACTACATCCGTCCAGAACTCTGCCTCATATAGCAATGGAAATCCTAATGGGGCCTTCTCTACACCGAGCTTTCCAGGCATGACTACACCTACACCTACACCTACACCTACACCTACACCTGAACCATGGAGACCGCCAAGTTCAAATAGTCAGTCAAACATAGCAGCAGCAGCACCATCCAATGTACCTTATGCTGGTTGGGGTATGCCAGGAAATCAGAATATTAACTGGAGTGGACCTCTACCTGCAAATGTGAACGTAAACTGGATGCCTGGACAGGGGCCAGGACCCAGTAATGCAACTCCAGTATGGGGTGCTCCTAGCCAGGGACCACCTGCGGCAAATGCTGTTGGCTGGGTTGCACCTGGTCAAGGACGTCCGCATGTAAATGCAAATGCAGGTTGGGTTGCACCTGGTCAAGGGCCAACGGTGGGAAGTACTAATCCTGGTTGGGGTTCTTCATCTGGAAATCCAGGCACGTGGGGTGGCGAGCAAAGTCGCAATGGGGAGAGATTCCACAGCCAGGGCGATCGTGGAACACATGGTGGAGATTCTGGTTATGGAGGTAAATCCTGGAACAGGCAATCATCATTTAATGGCAGCGGAAGAGGAGGTTCTTCCAGGCCTTCTGTTGGGGGACAAAGAGGAGTATGTAAGTTCCACGAGAGTGGACATTGCAAGAAGGGGGCTTCCTGTGATTTTATGCACACTTAA 4896 0.4542 MDAEDEEAQHLQHSYPLPYLSTTSPQCHSTGVEPVDAATTADNRETLVGEAEQAAVAANSGEAVEEAVEETEIGDSGNAGEGEMQVVEDKVVGPEVVVKGDDVENGEGQQEEDEIMVEATGVAKMEKEEAPLVDEHEIRDGEDNVVEQTEVPNEAASVVEREQGQEKEDAEKEQEEEEEEEEEAGGEQEADAASGMANEAALLEEDEQVLGQQHENAGADVVVGGVANEFIEVHEEGQQQQQQEEQEDADVGGGLLNEAAFMEEQEEAEKQGEDEEEEQAAASDDIANEAALTVDQEEEQADTGGDMTNEAAFTDEHEEEEEEEEEEDGGGSVGRMGEETEPTQGTEETEEQSRSVSGGKRKRGSGKNSKSTGRAPSRKKMEEDVCFICFDGGELVLCDRRGCPKAYHPSCVNRDEAFFRSKGKWNCGWHICSNCEKNAYYMCYTCTFSLCKGCIKDAVILCVRGNKGFCETCMRTVMLIEQNNHENMGQVDFDDRSSWEYLFKDYYLDLKEKLSLTFDELTQAKNPWKGSDRLPSKEESADELFDANNDRGSDSDSSYENVDLSRSKRRKGKKRTKSRSREGTSYASVDGASADETSEWASKELLEFVMHMRNGDRSILSQFDVQALLLEYIKRNKLRDPRRKSQIICDTRLQNLFGKPRVGHFEMLKLLESHFLLKEDSQTDDMQGSVLDTEISHLEGDGNSDSYVKAGKDKRRKTRKKGDERGLQTNVDDYAAIDNHNVNLIYLRRNLVEELLEDTEKFHDRVVGAFVRIRISGSGQKQDLYRLVQVVGTCKASEPYKVGKRMTDFLLEILNLNKTEIVSIDIISNQEFTEDECKRLRQSIKCGLINRLTLGDIQEKALALQAVRVNDWLETEIVRLSHLRDRASEKGRRKELRECVEKLQLLKTPEERQRRLEEIPEIHVDPKMDPSHESEEDEDEMDEKRQENYMRPRGPAAFGRRGREIISPRSGPISSDSWSATRNYSNVNRELSRNLSNKGFSSKGDDVSIANEVLNDAQLPQGRDWGSQSSGLERQKLSSSFESGTKSNQLLSTPDHFSAALSETSAVLSSVGAALPAMKINESEKMWHYQDPSGKVQGPFSMVQLRKWSNTGYFPADLRIWKASDKQDQSMLLTDALAGKFPTEPSMLDKTPAKAQSVIDPHYSSSYSGKSHLAVQAMEGQAGGRPSFDHNSGSHNPLGSPGQNAGGSWRSKDTMNSLASRPSLAVEVPKNLANGWGSDAGLGNEATNLPSPTPQTASGGTKMQAFENKWSPTPTPVLLAGSLLGNSLPVGPESRSSSQPGMISASKSDNNQVHVHAALPAIASGVDIQTAGVHLQSQSVSNHTSRAEGHQGWGSGTAPKPEVQTWGGAQPQRIEPNNPVTMPAQPASHGHWVDTTSVQNSASYSNGNPNGAFSTPSFPGMTTPTPTPTPTPTPEPWRPPSSNSQSNIAAAAPSNVPYAGWGMPGNQNINWSGPLPANVNVNWMPGQGPGPSNATPVWGAPSQGPPAANAVGWVAPGQGRPHVNANAGWVAPGQGPTVGSTNPGWGSSSGNPGTWGGEQSRNGERFHSQGDRGTHGGDSGYGGKSWNRQSSFNGSGRGGSSRPSVGGQRGVCKFHESGHCKKGASCDFMHT* 1632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 1370 1420 - -
Ahy7g1567 1631 PANTHER UNCHARACTERIZED 222 1631 - -
Ahy7g1567 1631 CDD Bbox1 431 457 - -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 1336 1448 - -
Ahy7g1567 1631 CDD GYF 1084 1139 IPR003169 GO:0005515
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 1583 1602 - -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 1178 1215 - -
Ahy7g1567 1631 ProSiteProfiles Plus3 domain profile. 736 869 IPR004343 GO:0003677
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 529 590 - -
Ahy7g1567 1631 SUPERFAMILY SWIB/MDM2 domain 599 676 IPR036885 -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 15 30 - -
Ahy7g1567 1631 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 372 477 IPR013083 -
Ahy7g1567 1631 ProSiteProfiles SWIB/MDM2 domain profile. 594 677 IPR003121 -
Ahy7g1567 1631 SUPERFAMILY GYF domain 1077 1137 IPR035445 -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 1421 1439 - -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 911 931 - -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 92 376 - -
Ahy7g1567 1631 CDD PHD5_NSD 385 430 - -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 267 283 - -
Ahy7g1567 1631 Coils Coil 160 190 - -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 1336 1351 - -
Ahy7g1567 1631 Pfam SWIB/MDM2 domain 602 675 IPR003121 -
Ahy7g1567 1631 Pfam GYF domain 1087 1128 IPR003169 GO:0005515
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 1143 1164 - -
Ahy7g1567 1631 ProSiteProfiles GYF domain profile. 1084 1138 IPR003169 GO:0005515
Ahy7g1567 1631 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19 222 1631 - -
Ahy7g1567 1631 SMART rtf1 736 846 IPR004343 GO:0003677
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 313 329 - -
Ahy7g1567 1631 CDD SWIB-MDM2_like 600 675 - -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 117 146 - -
Ahy7g1567 1631 SUPERFAMILY FYVE/PHD zinc finger 382 435 IPR011011 -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 1 33 - -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 1018 1049 - -
Ahy7g1567 1631 Gene3D SWIB/MDM2 domain 589 685 IPR036885 -
Ahy7g1567 1631 SMART gyf_5 1085 1140 IPR003169 GO:0005515
Ahy7g1567 1631 Pfam Plus-3 domain 741 844 IPR004343 GO:0003677
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 169 188 - -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 1021 1049 - -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 531 550 - -
Ahy7g1567 1631 Gene3D - 738 866 IPR036128 GO:0003677
Ahy7g1567 1631 SMART swib_2 602 680 IPR019835 -
Ahy7g1567 1631 Coils Coil 258 285 - -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 1535 1563 - -
Ahy7g1567 1631 ProSiteProfiles Zinc finger C3H1-type profile. 1606 1631 IPR000571 GO:0046872
Ahy7g1567 1631 Gene3D - 1085 1144 IPR035445 -
Ahy7g1567 1631 SUPERFAMILY Plus3-like 737 866 IPR036128 GO:0003677
Ahy7g1567 1631 ProSitePatterns Zinc finger PHD-type signature. 386 446 IPR019786 -
Ahy7g1567 1631 SMART PHD_3 385 431 IPR001965 -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 1531 1610 - -
Ahy7g1567 1631 ProSiteProfiles Zinc finger PHD-type profile. 383 449 IPR019787 -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 1187 1215 - -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 911 980 - -
Ahy7g1567 1631 MobiDBLite consensus disorder prediction 694 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1567 Ahy-Chr7 53150795 53161278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1567 383 470 PHD Transcription Factor Family AT5G36670 34.000 1.46e-06 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Ahy7g1567 Plus-3 6.70E-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1567 - - aip:107608758 2853.54