Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1565 ATGGAATTGCCGGAATACTTCATTGCGGGATATTTTGCCGCCACTCCGGACCAACTCTCGTCGGAGAAGCGTCACGCTGACCAGAAGCCCGGCGAGGTTTTCACCATTGACGACCTTCTCGACTTCTCCAACGCCAACACCGACGCTATCACATCTGACGGATTTTTCAACAATACCGCCGGAAACTCCACCGACGTCTCTGTCGTCACCGCAGTCGACAGCTGTAACTCCTCCATTTCCGGCAGCAGCTTCCGCTGCTTCGCCGGAGTGGATCCTCAATTCTCCGAAGAGTTCTGCGTTCCGTATGATGACGTGGCGGAACTGGAATGGCTCTCGAATTTCGTTGAAGAGTCCTTTCCGGCGGAGGAGGAGCTGAAAACCCTTCACCTTATCTCCGGCGTGAAGCCTCAGACACCTCAATCGTCTTCTTCTTCGGATGCTCGAAACGCACCGTTATTCCATCCCGAAACGCCTCTCCCAGCCAAGGCACGAAGCAAGCGCTCACGCGCCGCGCCTGGTGATTGGTCCACGCGCGTGGTTCGGGTTGTTAAAACGGACGCGGAGCAAAGGCCCGCGAAGAAGAGAGATGGGGCGAATTCCGAGGCATCGGGCCGAAAATGCCTGCACTGCGCGGCGGAACAGACGCCGCAGTGGCGAACCGGGCCCATCGGCCCAAAGACATTGTGCAATGCATGCGGGGTAAGGTATAAATCTGGGAGGTTAGTGCCGGAGTACCGGCCCGCTGCAAGCCCAACGTTTGTGTCCACGAAGCATTCAAATTCGCATAGGAAGGTGTTGGAGCTGAGGAGGCAGAAGGAGATGCAGCATCACCGTTTGATTGGTCAGAGTTCGGTTTTCGACATATCCAGCGGTGAAGATTCGTATTTGATTCATCGCCACAACTGTCCAGATTATAGGAACGTCTAA 927 0.5545 MELPEYFIAGYFAATPDQLSSEKRHADQKPGEVFTIDDLLDFSNANTDAITSDGFFNNTAGNSTDVSVVTAVDSCNSSISGSSFRCFAGVDPQFSEEFCVPYDDVAELEWLSNFVEESFPAEEELKTLHLISGVKPQTPQSSSSSDARNAPLFHPETPLPAKARSKRSRAAPGDWSTRVVRVVKTDAEQRPAKKRDGANSEASGRKCLHCAAEQTPQWRTGPIGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSTKHSNSHRKVLELRRQKEMQHHRLIGQSSVFDISSGEDSYLIHRHNCPDYRNV* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1565 308 CDD ZnF_GATA 206 253 IPR000679 GO:0006355|GO:0043565
Ahy7g1565 308 MobiDBLite consensus disorder prediction 181 202 - -
Ahy7g1565 308 Pfam GATA zinc finger 207 240 IPR000679 GO:0006355|GO:0043565
Ahy7g1565 308 PANTHER GATA TRANSCRIPTION FACTOR 1 284 - -
Ahy7g1565 308 PIRSF Txn_fac_GATA_plant 17 293 IPR016679 GO:0003677|GO:0005634|GO:0045893
Ahy7g1565 308 ProSiteProfiles GATA-type zinc finger domain profile. 201 237 IPR000679 GO:0006355|GO:0043565
Ahy7g1565 308 MobiDBLite consensus disorder prediction 134 204 - -
Ahy7g1565 308 SMART GATA_3 201 251 IPR000679 GO:0006355|GO:0043565
Ahy7g1565 308 MobiDBLite consensus disorder prediction 134 150 - -
Ahy7g1565 308 PANTHER GATA TRANSCRIPTION FACTOR 9 1 284 - -
Ahy7g1565 308 ProSitePatterns GATA-type zinc finger domain. 207 232 IPR000679 GO:0006355|GO:0043565
Ahy7g1565 308 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 203 265 - -
Ahy7g1565 308 Gene3D - 201 251 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1565 Ahy-Chr7 52962300 52963607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1565 34 308 C2C2-Gata Transcription Factor Family AT4G32890 49.175 1.67e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Ahy7g1565 GATA 3.40E-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1565 - - gmx:100801234 412.535