Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1556 ATGACTCGGCGGTGCTCACACTGTAGCAACAACGGCCACAATTCCAGGACATGCCCCAACCGCGGCGGCGGCGGAGTGAAGCTTTTCGGTGTGAGGCTGACGGATGGATCAATCATAAAGAAGAGTGCGAGTATGGGGAATCTGATGACGCTTCACCACCATTGTTCGTCTCCTTCTTCCTCGTTTGTGGCCACCGCCGGCGATAACCCAGGCTCGCCTGATCCCGTTGGTTACTTGTCCGACGACCCTGCCCACGCCTCGTCCTTCGCCAACCGCCGTGGCGAAAGAAAGAAAGGTGTTCCATGGACCGAAGAAGAACATCGGATGTTCTTAGTTGGTCTGCAAAAGCTGGGGAAAGGAGATTGGCGTGGAATATCACGTAATTTTGTTGTATCAAGAACCCCTACTCAAGTAGCAAGTCATGCCCAGAAGTATTTTATCCGACAGAGTAATGCTACCCGGAGAAAGAGGCGTTCCAGCCTCTTTGACATGGCTCCAGATATGCCTACGGAACCGCCTTCGGTGCTGGAAAAACAAGTACTGCTTCTGACCTCTGAGAACTCACAATCTCCCAATGTAAAATCACAACCTTCATTAAATCTATCTCTCAAATCTGAAGTTGACCCCATGGAAATTGCTTCTGAGGAAAATGTGAAAGAGAACAATGTAGCTAATGGGTTGAAAACAAAGGCTCCTGAATACTTCCCAACTTATGTACCTGTCCAATTTTCCATATGGCCATCACTGGAAGCTTCCTTTCAAGAAAGTAATGGAGTAGAGACATCTCATCATGAGGTTGTAAAGCCAATTCCAGTCGTTCCCAAGAATCCGGTCAATGTTGATGCACTTGTGGGAATGTCTAATCTGAGCATTGGAAACACACAGATGATTCTTGAAAGGGAGCCTTCCCCACTTTCCCTGAAATTGTTAGGAGAGCCATCGAGGCAGTCGGCATTCCATGCAAATACTCATGCGCCTGTTGGCCGGTCGGACCTAAGCAGTGGCAAGAACAATCCAATCCAAGCTGTTTGA 1032 0.4855 MTRRCSHCSNNGHNSRTCPNRGGGGVKLFGVRLTDGSIIKKSASMGNLMTLHHHCSSPSSSFVATAGDNPGSPDPVGYLSDDPAHASSFANRRGERKKGVPWTEEEHRMFLVGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMAPDMPTEPPSVLEKQVLLLTSENSQSPNVKSQPSLNLSLKSEVDPMEIASEENVKENNVANGLKTKAPEYFPTYVPVQFSIWPSLEASFQESNGVETSHHEVVKPIPVVPKNPVNVDALVGMSNLSIGNTQMILEREPSPLSLKLLGEPSRQSAFHANTHAPVGRSDLSSGKNNPIQAV* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1556 343 MobiDBLite consensus disorder prediction 59 99 - -
Ahy7g1556 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 150 IPR017930 -
Ahy7g1556 343 SUPERFAMILY Homeodomain-like 96 151 IPR009057 -
Ahy7g1556 343 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 97 149 IPR006447 GO:0003677
Ahy7g1556 343 ProSiteProfiles Myb-like domain profile. 94 146 IPR001005 -
Ahy7g1556 343 MobiDBLite consensus disorder prediction 1 18 - -
Ahy7g1556 343 Gene3D - 100 151 - -
Ahy7g1556 343 MobiDBLite consensus disorder prediction 324 343 - -
Ahy7g1556 343 SMART sant 98 148 IPR001005 -
Ahy7g1556 343 PANTHER OS01G0187900 PROTEIN 1 337 - -
Ahy7g1556 343 MobiDBLite consensus disorder prediction 1 21 - -
Ahy7g1556 343 CDD SANT 101 146 IPR001005 -
Ahy7g1556 343 Pfam Myb-like DNA-binding domain 101 146 IPR001005 -
Ahy7g1556 343 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Ahy7g1556 343 PANTHER TRANSCRIPTION FACTOR KUA1 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1556 Ahy-Chr7 52861247 52864048 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy7g1556 Myb_DNA-binding 1.20E-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1556 - - gmx:778036 467.618