Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1550 ATGCTCTCTATTCCCCTTGCTGGAATCTCCATACCCTTTTTAAGTAAGAAACAGAATCAGCGTGCAAATATAACACTACTACTACTCTTGAGCTCTGTGTTTAACGTGGCTGCAATGGATGAAAGCTCAAGAAATGACATGAAACTTGAACTCAGGCTTGCTCCACCTGGTGCTGAAGAACAACAACACTGGGGTTTCATTAATGGCATCAGAACAACAACAAAGAGAGATGAATCTTCTGTGCTATCTCTTGGTTACTTCCCTCATGCAACCATAACCACAACTACTACTACTACTACTTCTTCTTCTTCACAAGCAGCAGCACTACCGTTGCATAATAATAATGCAGACAAGAAAGTTGCAAATACAGCTGTTCCCAACACTTCTCAGAAAAGAACTGCTCCAGGTCCAGTAGTGGGTTGGCCTCCAATCCGTTCATTCAGGAAGAACCTTGCAAATAGCAGCAGCTCTTCAAAGCCACCTCCTCCTCCTCCTGAGCACCATAGCAAGGTGGTGGTTGGTGGAAAAGGCATGTTTGTCAAGATCAACATGGATGGTGTTCCCATTGGTAGAAAAGTTGACCTCAATGCTTACGATAGCTATGAAAATCTCTCCAATGCTGTGGACCAACTCTTCAAAGGCCTTCTTGCTGCTCAAAGAGATTCCTCTGGTGGTGGAGTTAACAAGCTACAAGAGGAAGAGAAAGTGATAACAGGTTTATTAGATGGAAGTGGAGAGTATACTCTTGTTTATGAGGATAATGAAGGAGACAGGATGCTTGTTGGGGATGTGCCATGGCACATGTTCGTATCAACAGTGAAGAGGCTGCGAGTCTTGAAGAGTTCTGAGCTTTCTGCCTTTACCCTTGGTGGTAAGCAAGACAAAGATGCAACTTGA 897 0.4381 MLSIPLAGISIPFLSKKQNQRANITLLLLLSSVFNVAAMDESSRNDMKLELRLAPPGAEEQQHWGFINGIRTTTKRDESSVLSLGYFPHATITTTTTTTTSSSSQAAALPLHNNNADKKVANTAVPNTSQKRTAPGPVVGWPPIRSFRKNLANSSSSSKPPPPPPEHHSKVVVGGKGMFVKINMDGVPIGRKVDLNAYDSYENLSNAVDQLFKGLLAAQRDSSGGGVNKLQEEEKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGGKQDKDAT* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1550 298 Pfam AUX/IAA family 49 286 IPR033389 -
Ahy7g1550 298 Gene3D - 173 292 - -
Ahy7g1550 298 ProSiteProfiles PB1 domain profile. 177 281 IPR000270 GO:0005515
Ahy7g1550 298 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 42 294 IPR003311 GO:0005634|GO:0006355
Ahy7g1550 298 PANTHER AUXIN-RESPONSIVE PROTEIN IAA26 42 294 - -
Ahy7g1550 298 SUPERFAMILY CAD & PB1 domains 174 278 - -
Ahy7g1550 298 MobiDBLite consensus disorder prediction 123 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1550 Ahy-Chr7 52772958 52775183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1550 181 292 B3 DNA Binding Superfamily AT4G23980 33.929 6.15e-15 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Ahy7g1550 AUX_IAA 8.30E-70 CL0072