Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1541 ATGGATGGTCTGAGTTGGGATCCTTCTTCACAACTTGCTGTTAATAACATACCAATGTTGGAAGGAGAAGAAGACTACTCCATCTTTGTTAATAATCACATGCAAGAGATGCACAAGTCTCATCATCGTCATGGATATCCAAATTCTGAAAAAGTGATGATGATGATGAGCAACATGGTTCAGTACCCATCATCAGCAACACCAGAAGCTGAGATTGTGAGTTTTCCACAGAGAACAAGAAACAACAACAACAATTTTAGTATGGCGGTGAAATCATCATCATCATCATCAACCGGTTGGGATGTAAAAGAAGCCTTAACATCTAATCACCAATCATGGCCATCACTTTCAGTAGTCAATTATGTGCCAGATTTCAATATGGCCCACCACCACCACCACCACCAACAACAACAACTCATCAACAGCACAACACAATCATCATCATCCCTTGAATCACTCGATTGCCTGCTTTCAGCTACCAACAGCAACACAGACACTACTACTGCTACTACTTCTCTTGAAGAAGATGATAGCATCTCCATCATTCTATCTGACTGCAGAAACTTCTGGAACTTCACTACTAATTATGGAGCCATCACTGCTGCTGCTGCTGCTTCCTCTGCTGAATCTGAAACCAATAATGTTTCCAACAAACAGAACAACATGCAATATCATCATCACCATCATCAGATCAATAATAAGGAGCTCGATGAAACAGTATCTCAAGCTTCAAAGAGGACAATCAATGACCAATATGACCTTATCAAAACTTCTTCTTCTGCTGCTGCAACCACCACCACTGGTCCCTACTTCAGTATCTTCCACAATTCTTCTTCTTCCGCCACTGAAAGCGGCGCCTTCAAGCTTATCAAAGAGAATCCTCTACCAAGATCCAAGAAACCAAGATGGGAGAATAACAACAACAACAACAACAATAAGCATGGTGGTTCATCATCCAACATCAACTTCCAGCAGCCGAATTCATCGCATTCCACCATTGACGAACCAGATCCAGAGGCCATTGCACAGATGAAGGAGATGATATATAGAGCTGCGGCATTTCGGCCTGTGAACTTGGGATTGGAGGTTGCGGAGAAGCCGAAGAGGAAGAACGTGAAGATATCAAGCGATCCTCAAACGGTAGCTGCAAGGCAAAGAAGGGAGAAAATAAGTGAAAGAATTAGGGTTTTGCAGAAGATTGTTCCTGGTGGAAGCAAGATGGACACAGCTTCAATGCTTGATGAAGCTGCTAACTACCTCAAGTTTCTTAGGTCACAGGTCAAAGCTCTTGAAAGCTTAGGGAACAAGCTTGACACCATGAATAATCATAATGTTCCTCCTACCACCACCATTGCTTTCTCTTTCAACCCTTCTTTTCCCATCATGCCATCTTATTTTCCCAACCCTAAACCCTAG 1416 0.4251 MDGLSWDPSSQLAVNNIPMLEGEEDYSIFVNNHMQEMHKSHHRHGYPNSEKVMMMMSNMVQYPSSATPEAEIVSFPQRTRNNNNNFSMAVKSSSSSSTGWDVKEALTSNHQSWPSLSVVNYVPDFNMAHHHHHHQQQQLINSTTQSSSSLESLDCLLSATNSNTDTTTATTSLEEDDSISIILSDCRNFWNFTTNYGAITAAAAASSAESETNNVSNKQNNMQYHHHHHQINNKELDETVSQASKRTINDQYDLIKTSSSAAATTTTGPYFSIFHNSSSSATESGAFKLIKENPLPRSKKPRWENNNNNNNNKHGGSSSNINFQQPNSSHSTIDEPDPEAIAQMKEMIYRAAAFRPVNLGLEVAEKPKRKNVKISSDPQTVAARQRREKISERIRVLQKIVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGNKLDTMNNHNVPPTTTIAFSFNPSFPIMPSYFPNPKP* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1541 471 Pfam Helix-loop-helix DNA-binding domain 384 423 IPR011598 GO:0046983
Ahy7g1541 471 Gene3D - 379 445 IPR036638 GO:0046983
Ahy7g1541 471 PANTHER TRANSCRIPTION FACTOR BHLH87 88 468 - -
Ahy7g1541 471 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 88 468 IPR045843 GO:0003700|GO:0006355
Ahy7g1541 471 Coils Coil 413 433 - -
Ahy7g1541 471 MobiDBLite consensus disorder prediction 300 334 - -
Ahy7g1541 471 MobiDBLite consensus disorder prediction 293 335 - -
Ahy7g1541 471 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 374 423 IPR011598 GO:0046983
Ahy7g1541 471 CDD bHLH_AtIND_like 375 433 - -
Ahy7g1541 471 SMART finulus 380 429 IPR011598 GO:0046983
Ahy7g1541 471 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 380 441 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1541 Ahy-Chr7 52591981 52593727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1541 135 471 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 47.353 2.41e-82 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy7g1541 HLH 1.50E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1541 - - aip:107612801 763.066