Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1460 ATGATATATTGTGGGTCTTATGATACCTTAAGGACTTTGATACATTTGAAATGTGGTGGTGCTGATGGGATCACAAAACTGAGCAAAATGACAGAAGTTGTAGCAGAACTCGATTTGAATCAACAGCCTTTGCATGACATAGAACAGCGAATTAGACGCCTAGAAGGCATAATTTTCAGAGTTAGGCAGCGGCAGAGGTGGTGCCGTAGTGATAGTCCTGTCCGAATGACTACATTCACCGGAGAAGTGTTGGTTGATGGGGTTCAAGATGAAGGCAGACCACAGCTGGAAGAAGTAGAGGCCGGAGATGATGTCAAAGAAAATGGTAATGTGGAAAGCAGCAGTTGTAGGGGCAAAAGGAAGGCATCTGCATATTTGGTTGCTAAGGCGCTGGGGATGGAAACTAACACCGATAAGGCAAAGGGACGCGCAGGAAACTATTTTGATTGTAACATATGCTTGAAAATGGCAAGAGATCCTGTTTTGACTTGCTGCGGTCACTTGTTCTGCTGGCCCTGCTTCTTTCGCTTGTCGTATGCTTATGCAAATGCTAGGGAATGCCCTGTATGTGAAGGAGAGGTCATGATCACATGCATTACTCCAATTTATGGATCTGTAGGTGTCAATGACAGTGATCAGCTAGAATCAGAAGAGAATGGTTGTGAAATTCCTGCTCGACCTTGTGCGCGCAGAGTGAAGGTTAGCAAGGTGAAGTGTTTCAGAAACCGTGGTTTTCCAATAAATAATCCCCGTACTTCAGCTCAAAGTTCAAGTACAGTAATCCAAGGAATCGCCTTACTTTCACCGCCAATCACTCCGCCGCAAAGACCTTTAGAGGGACTTGATTCCTATCTTGGAAGTGACTCTGAAGGAAGCACCATGCAGCTGAATCATAATGCTGCTTCGAACCATTCAGAGTCACATAATCAAAATGTTATTGCTGCAGCCGCCACATCTTCTGTTACTCCTTTGACTATGAATGATGATGCTATTGCTATTACAGATTCCAGTACACAAATCACCAATAGTAGTGGACAGATTATTTCTTCCGACCGTTCATCTCTAGTCGAATTGATGTAG 1080 0.4398 MIYCGSYDTLRTLIHLKCGGADGITKLSKMTEVVAELDLNQQPLHDIEQRIRRLEGIIFRVRQRQRWCRSDSPVRMTTFTGEVLVDGVQDEGRPQLEEVEAGDDVKENGNVESSSCRGKRKASAYLVAKALGMETNTDKAKGRAGNYFDCNICLKMARDPVLTCCGHLFCWPCFFRLSYAYANARECPVCEGEVMITCITPIYGSVGVNDSDQLESEENGCEIPARPCARRVKVSKVKCFRNRGFPINNPRTSAQSSSTVIQGIALLSPPITPPQRPLEGLDSYLGSDSEGSTMQLNHNAASNHSESHNQNVIAAAATSSVTPLTMNDDAIAITDSSTQITNSSGQIISSDRSSLVELM* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1460 359 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 260 IPR013083 -
Ahy7g1460 359 CDD RING-HC_AtRMA_like 148 192 - -
Ahy7g1460 359 ProSiteProfiles Zinc finger RING-type profile. 150 191 IPR001841 -
Ahy7g1460 359 SMART ring_2 150 190 IPR001841 -
Ahy7g1460 359 Pfam zinc-RING finger domain 150 191 IPR001841 -
Ahy7g1460 359 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 38 293 IPR045103 GO:0005783|GO:0006511|GO:0061630
Ahy7g1460 359 SUPERFAMILY RING/U-box 146 196 - -
Ahy7g1460 359 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 38 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1460 Ahy-Chr7 46570934 46572951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1460 107 233 C3H Transcription Factor Family AT3G58030 42.520 2.80e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1460 K10666 - gmx:100778919 192.2