Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1406 ATGGAAAGAATGTTCCCTCCAAAGAAGCCCTCAACTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGCGACTCGGGTCTCGTTCTCACCACTGACCCCAAACCTCGCCTCCGTTGGACCGTTGAACTCCATGAACGTTTCGTTGATGCTGTTACTCAGCTTGGTGGCCCTGATAAGGCGACTCCTAAAACCATCATGAGGGTTATGGGTGTGAAGGGTCTCACACTTTACCACCTCAAGAGCCACCTTCAGAAATTTAGGCTCGGGAAGCAGCCCCACAAGGAATTCAACGATCACTCGATTAAGGATGCTTCGGCAATAGAACTGCAACGAAACACTGCCTCGTCTTCTGCCATGATTGGCCGTAACATGAACGAGATGCAAATAGAGGTGCAGCGAAGACTCCATGAACAACTTGAGGTGCAAAAACATCTTCAGCTAAGGATTGAGGCACAAGGAAAATACATGCAAAGCATATTGGAAAAGGCGTATCAAACCCTGGCAACTGAGAACATGGGGGCGGTGGCGGCAGCGGCAACGAACATGAAGGGGATTGGAGGCGGAGCCCATGGAATCCCTGACATGGGTGTCATGAAGGACTATGGTTCCCCTCTAAACTTCACATCTTTCCAAGACCTTGACATGTACGGCGGCGGAGGCGGAAATGACCAAATTGACCTTCACCAAAACCTGGAGAAGCCAACCCTTGACGGTAGTGGATTCCTTCCAATCAATGAGGGTCTTTGCCTTGGTGGGAGCAATAACAATAGTAATAACAAGAAGAGGCCAAACCCTTATGGTAGTGGCAACAACACTGGGAAAAGCCCTTTGATTTGGAGTGACGATCTTAGGCTTCAAGATTTGGGAACAGCTTCTTCATGCCTTGGTGATGATCCTTTGTTCAAAGGTGAACAAATCCAGATGGATCATAGAGGAACTCATGAGATTGATCCAATGGCTGAGATCTATGACACAAAGCCTGTTCTTCAAGGTGCTGACGGAGATAACAAGAAATTTGATGCTTCTATGAAGCTTGAAAGGCCTTCACCCAGAAGGATGAGTCCTATGATCAGCACTGGAACCATGGCACTAGGTAGAAGCTCACCATTTGGATGA 1119 0.479 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASAIELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLATENMGAVAAAATNMKGIGGGAHGIPDMGVMKDYGSPLNFTSFQDLDMYGGGGGNDQIDLHQNLEKPTLDGSGFLPINEGLCLGGSNNNSNNKKRPNPYGSGNNTGKSPLIWSDDLRLQDLGTASSCLGDDPLFKGEQIQMDHRGTHEIDPMAEIYDTKPVLQGADGDNKKFDASMKLERPSPRRMSPMISTGTMALGRSSPFG* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1406 372 MobiDBLite consensus disorder prediction 253 274 - -
Ahy7g1406 372 MobiDBLite consensus disorder prediction 1 20 - -
Ahy7g1406 372 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Ahy7g1406 372 Gene3D - 34 92 - -
Ahy7g1406 372 MobiDBLite consensus disorder prediction 347 372 - -
Ahy7g1406 372 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 329 IPR044848 GO:0003700
Ahy7g1406 372 Pfam MYB-CC type transfactor, LHEQLE motif 128 167 IPR025756 -
Ahy7g1406 372 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Ahy7g1406 372 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Ahy7g1406 372 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
Ahy7g1406 372 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1406 Ahy-Chr7 39702552 39705386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1406 4 372 G2-like Transcription Factor Family AT1G79430 56.883 4.19e-122 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy7g1406 Myb_DNA-binding 2.00E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1406 - - ccaj:109805894 528.865