Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1364 ATGGATAAATCTGAGCAGACTCAGCAGCAGCAGCAACAACAACAACAGCATGTGATAGGTGTTGCAGCAAGTGCTAGCCAAATGGCTTATTCTTCTCACTACCCGACTGCTCCTATGATGGCATCTGGTACACCTGCTGTAGTTGTGCCTTCACCGACGCAGTCTCCAACCGCTTTTTCCAATTCCCCGCACCAGCTTGCATACCAGCAAGCGCAACACTTCCATCACCAGCAACAGCAGCAACAGCAGCAGCAGCTTCAACTGTTCTGGGCAAACCAAATGCAAGAAATTGAGCAAACAATTGACTTTAAGAACCACATCCTCCCCCTTGCTCGCATTAAAAAGATCATGAAAGCCGATGAAGATGTCCGGATGATTTCAGCAGAAGCTCCAGTAATATTTGCAAAAGCATGTGAAATGTTCATCCTGGAGTTGACTTTGCGATCTTGGATCCACACCGAAGAGAACAAGAGGAGAACTCTGCAAAAGAATGATATAGCAGCTGCTATTTCGAGAAATGATGTTTTTGATTTCTTGGTTGATATCATTCCAAGAGATGAGTTGAAAGAGGAGGGACTCGGAATAGCAAAGGCTACTATTCCAATAGTGGGTTCTCCGGCTGATATGCCATATTATTATGTCTCTCCGCAGCACCCTGTAGGGCCTCCAGGGATGATAATGGGAAAGCCAGTTGATCAAGCAGCACTGTATTCCACACAGCAGCCTCGAGCTCCGATGGCTTTCATGCCATGGCCGCAGGCGCCCTCGCAACAGCAGCCACCCCAACAGGAACAAACAGACTCTTGA 807 0.4758 MDKSEQTQQQQQQQQQHVIGVAASASQMAYSSHYPTAPMMASGTPAVVVPSPTQSPTAFSNSPHQLAYQQAQHFHHQQQQQQQQQLQLFWANQMQEIEQTIDFKNHILPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFLVDIIPRDELKEEGLGIAKATIPIVGSPADMPYYYVSPQHPVGPPGMIMGKPVDQAALYSTQQPRAPMAFMPWPQAPSQQQPPQQEQTDS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1364 268 SUPERFAMILY Histone-fold 64 179 IPR009072 GO:0046982
Ahy7g1364 268 Pfam Core histone H2A/H2B/H3/H4 61 170 IPR007125 GO:0003677
Ahy7g1364 268 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 10 262 - -
Ahy7g1364 268 MobiDBLite consensus disorder prediction 246 268 - -
Ahy7g1364 268 Gene3D Histone, subunit A 68 185 IPR009072 GO:0046982
Ahy7g1364 268 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 10 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1364 Ahy-Chr7 33598375 33601434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1364 86 217 CCAAT-HAP5 Transcription Factor Family AT1G56170 87.218 4.10e-81 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Ahy7g1364 CBFD_NFYB_HMF 7.00E-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1364 K08066 - gmx:100796987 385.185