Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1291 ATGGGCCTCTCAAGTCTGCCATCGCCGTCCGAAGGAGTGCTATGTGCACTTCTTGTTAACACTGTGCTCTCAGTCTCCATATTTAAAGGCATTGTTAGGACAATCCTTCACATTGTTGGCATCCACCTTTCATCATCCTCTTCGCCGAACGCCACCTCCCAGAGCCATCAACCATCCGAGTCATTCGAGTTCCTCCTTAGCCCCTCAGAAACATTCATCGAAGAGTTTAGGAGCCGGACGCCTACAATCCGCTTCGACAGCATGTTCTCCTGTGGGAAACCTGAACATGACTGCTGTGTGTGCCTCTCTCAATTTGAGCCGGAATCTGAGATAAACCGCTTGCCCTGCGGCCATCTCTTCCACAAAGTGTGCTTGGAGAAGTGGTTGGATTATTGGAACATCACATGCCCACTTTGCAGGAACCCTTTGATGCCTGAAGACAATGATCCATGGCTCTTAGTAAGCAATGAATGA 474 0.4937 MGLSSLPSPSEGVLCALLVNTVLSVSIFKGIVRTILHIVGIHLSSSSSPNATSQSHQPSESFEFLLSPSETFIEEFRSRTPTIRFDSMFSCGKPEHDCCVCLSQFEPESEINRLPCGHLFHKVCLEKWLDYWNITCPLCRNPLMPEDNDPWLLVSNE* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1291 157 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 148 - -
Ahy7g1291 157 PANTHER - 1 148 IPR044249 -
Ahy7g1291 157 Pfam Ring finger domain 97 140 IPR001841 -
Ahy7g1291 157 SMART ring_2 98 139 IPR001841 -
Ahy7g1291 157 SMART ringv_2 97 140 IPR011016 GO:0008270
Ahy7g1291 157 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Ahy7g1291 157 SUPERFAMILY RING/U-box 97 146 - -
Ahy7g1291 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 145 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1291 Ahy-Chr7 25993009 25994855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1291 1 149 C3H Transcription Factor Family AT2G04240 58.974 1.47e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1291 K16285 - gmx:100786803 247.284