Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1280 ATGAAGAAATCACCTTCAAGCAGCATCAATAAAAGTTTGCATAATCAATATAGCCAAAGAAAAGAGAATGATCGTTCTTTCTTGAAATCTTTCAAGTCTGCTTTCAGAGCTGTTTTTGCATTGTTCCTCTCCGGAAGCAAAAGAAAAACACCCTCAAAAGTTGATGAAAGAAACAACATATCAAAAGTCAGAGGAGTATCATCTTCAATTGACTCATCCAAAAGTTCATCAAAATGGAAATTTTCTAACTCCTATGCATCATCATCTAGAACTGCAAGTGGGCAACTTGAGATTGGAAACTTCACCTTTGAAGAAATCTACAAGTCAACGTCAAGATTCTCCTCGGAGAATCAGATAGGAGAAGGTGGATTTGGAACAGTTTACAAAGGTAAGCTTAACGACGGAACTCTTGTTGCCGTGAAGCGCGCCAAGAAGGACGGACCGAAACACTTGTACGAGTTCAAGAATGAAATATACACCTTGTCAAAGATTGAGCATCGGAATCTTGTGAGGCTATATGGATATTTGGAGCTTGGAGAAGAGAAGATTATTGTTGTTGAGTATGTTAGTAATGGGACCCTTCGCGATCATCTAGATGGTACTCAAGGGGATGGACTAGAAATTGCTGAGCGTCTAGACGTAGCAATTGATGTGGCTCACGCAATCACTTACCTTCACATGTACACAGATAATCCAATTATTCATAGAGACATAAAAGCATCAAACATTCTAATCACAGAGAACTTAAGGGCCAAAGTGGCAGACTTTGGTTTTGCACGCTTGTCTGATGACCCTTCAGCAACTCATATTTCAACTCAAGTTAAAGGAACTGCTGGCTACATGGATCCTGAGTACCTGAGAACATACCAACTCACTGATAAGAGCGACGTTTATTCGTTCGGCGTTTTGCTCGTCGAAATGATGACAGGACGGCATCCCATCGAGCCCAACAGACCCCTCCAAGAGAGAGTCACAATCAGATGGGCAATGAAGATGCTGAAACAAGGGGATGCTGTGTTTGCAATGGATCCGAGAATGCGAAGAAGCCCGGCCTCTAACAAGGCAGTGAAGAAGGTTCTAAAACTAGCCTTCCAATGCCTTGCACCGTCGCGGGAATTGCGGCCATCAATGAAGAGTTGTGCAGAGGTTCTATGGGGAATCAGGAAAAGCTTTAGAGATGAAGCCACTTCTAATGTTCCTCCTCTTCCTTCTCACCAATCTGAAAATTTTCCTCAAAGAGGAAAGAATTTGCAAACGGTATTTGGTATTGAGGATGATGAGAGCAATAAATTTGCTTCTGCACCTAACCAAATTCATTCATAA 1323 0.418 MKKSPSSSINKSLHNQYSQRKENDRSFLKSFKSAFRAVFALFLSGSKRKTPSKVDERNNISKVRGVSSSIDSSKSSSKWKFSNSYASSSRTASGQLEIGNFTFEEIYKSTSRFSSENQIGEGGFGTVYKGKLNDGTLVAVKRAKKDGPKHLYEFKNEIYTLSKIEHRNLVRLYGYLELGEEKIIVVEYVSNGTLRDHLDGTQGDGLEIAERLDVAIDVAHAITYLHMYTDNPIIHRDIKASNILITENLRAKVADFGFARLSDDPSATHISTQVKGTAGYMDPEYLRTYQLTDKSDVYSFGVLLVEMMTGRHPIEPNRPLQERVTIRWAMKMLKQGDAVFAMDPRMRRSPASNKAVKKVLKLAFQCLAPSRELRPSMKSCAEVLWGIRKSFRDEATSNVPPLPSHQSENFPQRGKNLQTVFGIEDDESNKFASAPNQIHS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1280 440 SMART serkin_6 113 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy7g1280 440 SUPERFAMILY Protein kinase-like (PK-like) 89 387 IPR011009 -
Ahy7g1280 440 ProSitePatterns Protein kinases ATP-binding region signature. 119 145 IPR017441 GO:0005524
Ahy7g1280 440 Gene3D Phosphorylase Kinase; domain 1 72 188 - -
Ahy7g1280 440 MobiDBLite consensus disorder prediction 1 23 - -
Ahy7g1280 440 PANTHER RECEPTOR-LIKE PROTEIN 55 14 411 - -
Ahy7g1280 440 Pfam Protein tyrosine and serine/threonine kinase 116 384 IPR001245 GO:0004672|GO:0006468
Ahy7g1280 440 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 14 411 - -
Ahy7g1280 440 CDD STKc_IRAK 119 384 - -
Ahy7g1280 440 MobiDBLite consensus disorder prediction 1 16 - -
Ahy7g1280 440 ProSiteProfiles Protein kinase domain profile. 113 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy7g1280 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Ahy7g1280 440 Gene3D Transferase(Phosphotransferase) domain 1 189 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1280 Ahy-Chr7 25519405 25523092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1280 84 377 Receptor kinase-like Gene Family AT1G79620 43.000 2.43e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Ahy7g1280 PK_Tyr_Ser-Thr 7.30E-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1280 - - gmx:100811511 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1540 17 31269320 31273215 Ahy7g1280 7 25519405 25523092 hybridization
Ahy7g1280 7 25519405 25523092 Ahy17g0514 17 4957069 4961117 PCT
Ahy7g1280 7 25519405 25523092 Ahy7g0361 7 3027744 3031760 PCT