Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1237 ATGGAATCTTTGGATGCCACCATTTCTTCTAATTCACCATCTTCAATATTATCATCTTCTAGTGGTGTGAATAATAATGATAATATTAGTAGTGTAAGTAATGATAACAATGTTAATAGTAATAGTAATGGTGGAACTGTGACATGGTATGGTGTGAGGCTACCATCTGTTAGCCCTTTACGTTCCCCACTTTCCTTTCTCTTGGATTACTCTGGCATTCTAAGATCAAGCCATGATTCTGAGAGTTTGGTTGTGAACAATGGTGTTACGGGTCTAGAATTGCGGTCTGAGCCTCGGATTCAGTCACCTGATGATGCTGGTGGTGTTGCTTCTGGGACACCCTGCAACAACGGTGCTGCTGGGGAGGTTGCAATAAGGATCATTGGTGCTGGAGAGCATGATCACAATGTGGGGTTAGGTTCGTCTATTCCCTCATCGTCAAGGAGTCAGATTGGAGAAGCGGGGTATGATGGTTGTGATGAGATGATTGGTGATAGAGGGGGAATTGATGATGATGCCGAGGGTCGTCGCAATGGAGTTCCGGTCAGCGAGAGGGTGCCTCTGGTGTCTCCAGCTTCTTCTTCGTCTTTGGCTGGTGGTAGTGGGCAGGCTGATGGCGATGTGGGGAATGGTGTAGATAGTAACAATAGGGATTCCTCAAACTACCAGCGATATGACATTCAGCGGATTGCAAAGTGGATTGAGCAGATTCTTCCTTTCTCACTCTTGTTACTGGTTGTTTTCATCCGTCAGCATTTGCAAGGTTTCTTTGTCACAATTTGGATATCAGCTGTGATGTTCAAGTCAAATGAAATTGTTAAGAAGCAGACAGCTTTAAAGGGGGATAGGAAAGTGTCAGTTCTTGTTGGTATATCTATTGCCTTCATGCTTCATGTGATGTTCATTTATTGGTGGTATCGAAATGATGATCTTTTATACCCACTGGTGTTGGTTCCCCCGAAAGCAAATCCTTTCTGGCATGCAATATTCATCATCCTAGTTAATGATGCATTGGTGCGGCAAGCAGCAATGGCCTTCAAGTGTATTCTGTTAATATATTACAAAAGTGGCAGAGGTCATAGCTTCCGTCGGCAGGCTCAAATGTTAACGCTGGTTGAGTACACACTGCTATTGTATCGTGCCTTATTACCAACACCTGTTTGGTACCGGTTTTTCTTAAACAGGGCATACGGCAGTCTCTTTTCATCCCTGACCACAGGGTTATATTTAACTTTCAAGCTAACATCTGTTGTTGAGAAGGTCCAATGCTTTTTATCTGCCTTGAAAGCATTGTCAAGAAAGGAAGTTCATTATGGAGTTAATGCCACAATGGAGCAGGTTAATGCTGCTGGTGACTTATGCGCCATATGCCAGGAGAAAATGCATGCCCCCATATTGTTGCGCTGCAAACACATTTTCTGCGAGGAGTGTGTGTCAGAATGGTTTGAGAGAGAAAGGACATGCCCTCTATGCAGAGCACTGGTAAAGCCTGCTGATCTGCGTACCTTCGGAGACGGATCAACGAGTCTCTTTTTCCAGTTGTTCTAG 1548 0.4412 MESLDATISSNSPSSILSSSSGVNNNDNISSVSNDNNVNSNSNGGTVTWYGVRLPSVSPLRSPLSFLLDYSGILRSSHDSESLVVNNGVTGLELRSEPRIQSPDDAGGVASGTPCNNGAAGEVAIRIIGAGEHDHNVGLGSSIPSSSRSQIGEAGYDGCDEMIGDRGGIDDDAEGRRNGVPVSERVPLVSPASSSSLAGGSGQADGDVGNGVDSNNRDSSNYQRYDIQRIAKWIEQILPFSLLLLVVFIRQHLQGFFVTIWISAVMFKSNEIVKKQTALKGDRKVSVLVGISIAFMLHVMFIYWWYRNDDLLYPLVLVPPKANPFWHAIFIILVNDALVRQAAMAFKCILLIYYKSGRGHSFRRQAQMLTLVEYTLLLYRALLPTPVWYRFFLNRAYGSLFSSLTTGLYLTFKLTSVVEKVQCFLSALKALSRKEVHYGVNATMEQVNAAGDLCAICQEKMHAPILLRCKHIFCEECVSEWFERERTCPLCRALVKPADLRTFGDGSTSLFFQLF* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1237 515 MobiDBLite consensus disorder prediction 165 217 - -
Ahy7g1237 515 MobiDBLite consensus disorder prediction 165 179 - -
Ahy7g1237 515 ProSiteProfiles Zinc finger RING-type profile. 454 492 IPR001841 -
Ahy7g1237 515 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 20 515 - -
Ahy7g1237 515 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 429 502 IPR013083 -
Ahy7g1237 515 CDD RING-HC_RNFT1_like 453 492 - -
Ahy7g1237 515 Pfam Zinc finger, C3HC4 type (RING finger) 452 495 - -
Ahy7g1237 515 ProSitePatterns Zinc finger RING-type signature. 469 478 IPR017907 -
Ahy7g1237 515 SUPERFAMILY RING/U-box 445 497 - -
Ahy7g1237 515 SMART ring_2 454 491 IPR001841 -
Ahy7g1237 515 MobiDBLite consensus disorder prediction 1 39 - -
Ahy7g1237 515 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 20 515 IPR044235 GO:0061630|GO:1904294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1237 Ahy-Chr7 23107205 23120267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1237 60 515 C3H Transcription Factor Family AT5G01960 61.171 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1237 - K22379 gmx:100784614 600.897