Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1234 ATGTGCAGCGGTTCCAACAGGAAACCTACTCAAACTGGTTTGGTTATGGAGGATGATTATGGAAGAGAAGAAGGGCAGCATCAAAAGATATCTGCTTTGCTTGAACTTGCAGCTGCAGATGACCTAATTGGTTTCAAAGATGCAGTTGAGAAAGAGGGTTGTGATGTTGATGAGGCCGGGTCGTGGTTTGGAAGGAGGCTTGGCTCAAAGAAAGTGGGTTATGAAGAGAGGACACCACTTATGGTTGCTGCTATGTTTGGAAACCTGAGAGTTTTGGCTTATATTCTTGGAACTGGCTGTGTTGATGTTAACAGGGCTAGTGGCTCGGATGGGGCTACTGCAATTCATTGTGCTGTTGCTGGGGGTTCTGCTGCTTCCCTCGAGGTTGTCAAGCTTTTGCTTGAATCATCGGCAGATGTTAGTACTGTTGTTTCAAATGGTAACCGGCCTTGCGATTTGGTTGTCTCTGGGGCTAACTCTATCCCCAATTCAAGGAAGAGGATGCTGCAAGCCATGCTGGAAGGTACAGTTGGTACTGACAAGACGTTAGAGGATGTAGTTGGCCAAATCGAGGAACAACAAAGGGAAAACGTGGTGAACACGCCCCGTGTGTTGAAAGATGGGGCTGAGCGGAAGGATTATCCTGTTGATCACTCTCTTCCTGACATAAAGAACGGGATATATGGTACTGACGAGTTCAGGATGTATACATTCAAGGTGAAGCCTTGTTCAAGGGCTTATTCTCATGATTGGACCGAGTGTCCCTTTGTTCACCCAGGGGAAAATGCCAGGCGACGCGATCCAAGGAAATACCATTATAGCTGTGTGCCTTGTCCTGAATTCCGTAAGGGGTCATGCAGCAAGGGAGATTTATGCGAGTATGCACATGGTATTTTCGAGTGTTGGCTTCATCCTGCCCAGTACCGGACCCGGCTTTGCAAGGACGAGGGTGCATGTACAAGAAGAGTTTGCTTCTTTGCACACAAGCCTGAGGAGCTTCGCCCCCTCTATGCTTCTACTGGTTCGGCTATGCCATCTCCTAGATCCTACTCCAGTGGTTCTTCATTGGATATGGGTCCAGTTAGCCCAATAACACTTGGTTCTCCATCTGTTATGATACCACCTGCGTCAACACCGCCTTTGACTCCTTCTGGATCTTCCTCTCCTCTCTCCGGATCCATGTGGCAGACTCAATCTAACATCCCAACCCTGCAGCTTCCTAGAAGCAGCAGATTGAAAACTGCTTTAGCTGCTAGCGATATTAATTCGGATACTGAATTGCTTATGCTAATGATGGATGAGATGACTGGTCTTTCCTCCCCTTCCGGTTGGAGAAATTCCTTGACTAATAATCCATCTTATCATTATTCTTTGGGCGATCGTGCTGCAGATCTAAATAGGCTTTCAGGAGTGATGCCTACTAACCTTGACGACACTTTTGGGTCTGTCGACCCGTCAATTTTGTCCAAATTCAATGGAATCTCATTTGATGCTGCAGGACCTCAGTTACATCTTCCAACTGGATTGCAGATGCGCCAGAACATGAATCAGCAGCTGCGAGGCTATTCTTCTGGCCTTCCTTCTCCGAAAGTGATTGGATCCCCAAAATCCAGGGTTGATCCATCAGGGGAACCGACTGCACTGGCTTTTAATCCAAGACTTGCTGCCTTTTCACAGCGGAGCCAGAGCTTCATCGAGCGCAGCATGGGAAACCGTCATTCTGAGGTTCCTTCGCTGGCCACCTCTGTGGCAGCAAAGCCTTCTTTGGCATATTCTCATTGGGGCTCTCATGATGGAAAATTGGACTGGCCGATGCAGGGCGAAGAGCTGAACAAGCTGAGGAAATCTGCTTCTTTTGGATTTCGAAGCAGCAGCAATATTCCCTCGCCCAGGGCTGCGACCAGAATGTCAGCTGCAAAAGTTGACGAGCCGGACGTGTCTTGGGTTAGCTCGCTTGTGAAGGACGCTCCGGCACAGCCAGAGCCCGGCCAGTTTAGTGCCGAAGATCAGCAACAGCTGCAATGTCATCTCAACAATGGAACAGATGTGATTCCAGCATGGTTGGAGCAAATGTACATTGACCAGGAGCAAATGGTGGCATGA 2103 0.4855 MCSGSNRKPTQTGLVMEDDYGREEGQHQKISALLELAAADDLIGFKDAVEKEGCDVDEAGSWFGRRLGSKKVGYEERTPLMVAAMFGNLRVLAYILGTGCVDVNRASGSDGATAIHCAVAGGSAASLEVVKLLLESSADVSTVVSNGNRPCDLVVSGANSIPNSRKRMLQAMLEGTVGTDKTLEDVVGQIEEQQRENVVNTPRVLKDGAERKDYPVDHSLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSKGDLCEYAHGIFECWLHPAQYRTRLCKDEGACTRRVCFFAHKPEELRPLYASTGSAMPSPRSYSSGSSLDMGPVSPITLGSPSVMIPPASTPPLTPSGSSSPLSGSMWQTQSNIPTLQLPRSSRLKTALAASDINSDTELLMLMMDEMTGLSSPSGWRNSLTNNPSYHYSLGDRAADLNRLSGVMPTNLDDTFGSVDPSILSKFNGISFDAAGPQLHLPTGLQMRQNMNQQLRGYSSGLPSPKVIGSPKSRVDPSGEPTALAFNPRLAAFSQRSQSFIERSMGNRHSEVPSLATSVAAKPSLAYSHWGSHDGKLDWPMQGEELNKLRKSASFGFRSSSNIPSPRAATRMSAAKVDEPDVSWVSSLVKDAPAQPEPGQFSAEDQQQLQCHLNNGTDVIPAWLEQMYIDQEQMVA* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1234 700 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 277 297 IPR000571 GO:0046872
Ahy7g1234 700 Gene3D - 8 190 IPR036770 -
Ahy7g1234 700 Gene3D - 273 335 - -
Ahy7g1234 700 ProSiteProfiles Ankyrin repeat region circular profile. 110 141 - -
Ahy7g1234 700 SMART ANK_2a 75 105 IPR002110 GO:0005515
Ahy7g1234 700 SMART ANK_2a 110 142 IPR002110 GO:0005515
Ahy7g1234 700 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 20 699 - -
Ahy7g1234 700 MobiDBLite consensus disorder prediction 342 358 - -
Ahy7g1234 700 MobiDBLite consensus disorder prediction 338 358 - -
Ahy7g1234 700 ProSiteProfiles Ankyrin repeat profile. 110 145 IPR002110 GO:0005515
Ahy7g1234 700 PANTHER UNKEMPT FAMILY MEMBER 20 699 IPR045234 -
Ahy7g1234 700 MobiDBLite consensus disorder prediction 370 392 - -
Ahy7g1234 700 Pfam Ankyrin repeats (3 copies) 54 141 IPR002110 GO:0005515
Ahy7g1234 700 SMART c3hfinal6 307 330 IPR000571 GO:0046872
Ahy7g1234 700 SMART c3hfinal6 272 298 IPR000571 GO:0046872
Ahy7g1234 700 SUPERFAMILY Ankyrin repeat 34 159 IPR036770 -
Ahy7g1234 700 ProSiteProfiles Zinc finger C3H1-type profile. 277 299 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1234 Ahy-Chr7 22351905 22355288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1234 24 695 C2H2 Transcription Factor Family AT5G12850 38.472 2.66e-139 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy7g1234 Ank_2 1.30E-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1234 - - aprc:113846970 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1495 17 28154207 28157613 Ahy7g1234 7 22351905 22355288 hybridization