Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1196 ATGGTGGTTGTGATAGTAGACCTAGATAACAACAATCTTGATTGTGTGTTATTTGGTGACATGGTCGATCAAATAGTTCCCCATCTTGAAAATGGCAGGGTTGAACCACTGATAGTGATGTTGCAGTTCTTTAAACCTAGCCGATGGAATGATAAGGTATCGGTTCAGAGCCACTTTGATGTCTCTAAAATACATGTTAATCCTGACATGAAGGAAGTACATGATTTTCGGAAAAGCTTGCTTGGCAGTGTAACCTCTAATTCGGTCAGGATTAGTCAGGTATCCGGTCATGGTGTGCAATCTGGTGCTGCAGAACTGAAAAGAGGAGGTGTCGTAGTGAAATCAATAGAGGACGCACTCAACTCAATAAAGGAAGGTCCTATATGGACTGTCGGAACCATTGTCTCTATCAATGCTGGCAACAACGATTGGTTTTATAAATCGTGTAGGAAGTGTCTAAAGAAAGTAGAAACCCCAATTGGAAATCGATATGAATGTTCCAAGTGTGGTCACACACATGGCAGTGCATCCCTTAGGTACAAGGTTGAAGTTATGGCCTATGATGGAACAGGAAGTATAACTATGCTAATGTGGGATAGAGAAACAACACAGCTTATAGGGAGGCAAGCTAAACAAATCAAGGATGAAGATTGTTTGGAAGGGGAATGTTACCCCCCAACTCTTGATAACATGATGGATAAAAAGTTACTCTTTAAAATTAATGTCAAAACAGCCAACATCAACAAGCATGACCAGGTTTACACTATCACGAAGATATGTGACGATGAAGACATTGTAGAAAAAAATTGCCCCTATGGAATTCATCAGCAATTCTTTTGA 840 0.4012 MVVVIVDLDNNNLDCVLFGDMVDQIVPHLENGRVEPLIVMLQFFKPSRWNDKVSVQSHFDVSKIHVNPDMKEVHDFRKSLLGSVTSNSVRISQVSGHGVQSGAAELKRGGVVVKSIEDALNSIKEGPIWTVGTIVSINAGNNDWFYKSCRKCLKKVETPIGNRYECSKCGHTHGSASLRYKVEVMAYDGTGSITMLMWDRETTQLIGRQAKQIKDEDCLEGECYPPTLDNMMDKKLLFKINVKTANINKHDQVYTITKICDDEDIVEKNCPYGIHQQFF* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1196 279 PANTHER REPLICATION FACTOR A 1, RFA1 39 270 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy7g1196 279 Gene3D - 91 269 IPR012340 -
Ahy7g1196 279 SUPERFAMILY Nucleic acid-binding proteins 3 80 IPR012340 -
Ahy7g1196 279 CDD RPA1_DBD_C 113 259 IPR013955 -
Ahy7g1196 279 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A-LIKE 39 270 - -
Ahy7g1196 279 CDD RPA1_DBD_B_like 5 80 - -
Ahy7g1196 279 Pfam Replication factor-A C terminal domain 132 259 IPR013955 -
Ahy7g1196 279 Gene3D - 1 86 IPR012340 -
Ahy7g1196 279 SUPERFAMILY Nucleic acid-binding proteins 124 261 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1196 Ahy-Chr7 21332880 21337774 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1196 57 252 Core DNA Replication Machinery Family AT5G08020 23.881 2.58e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1196 - - ahf:112702779 567.385