Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1183 ATGTCGGAGTCGGAGGTTGTTTGCGTCACCGGCGGAAGCGGTTGTATTGGTTCGTGGCTTGTCCACCTCCTCCTCACTCGAGGCTACACCGTTCATGCCACCGTCAAAGATCTCAAGGATGATACTGAGACGAAGCATCTAGAAGCTCTCGAAGGAGCGTCCACGCGCCTCCGTCTCTTTCAAATCGACCTGCTCCAGTACGAGACCATCGTCGCCGCCGTGCGCGGATGCTCCGGCGTCTTCCACCTCGCTTCACCCTGCATTGTCGACGAAGTCCATGACCCACAGCTGTGGTATCCGCTATCCAAGACTTTAGCTGAGAAAGCTGCTTGGGATTTTGCAAAGGAGAAAGACTTGGATGTTGTGGTGGTGAATCCCGGAACTGTGATGGGACCTGTTATTTCACCCAGACTTAATGCTAGTATGATCATGCTTGTTCGCCTTCTTGAAGGGTGTGATGAAACATATGAGAACTTTTTTATGGGATCAGTCCACTTTAAGGATGTAGCTTTAGCACATATTATGGTGTATGAGAACAAAACAGCAACCGGTAGGCATTTGTGTGTAGAAGCCATCTCTCACTATGGCGACTTTGTGGCGAAAGTTGCGGAGCTTTATCCACAGTACAATGTGCCTAAGATCCCAAGAGATACCCAACCAGGATTATTGAGGGCAAAGGATGGATCGAAGAAACTTATGGATCTGGGTTTGGAATTTATTCCCATGGAGAAAATTATCAAGGATGCTGTAGAGAGTTTGAAGAGCAAAGGGTTCATTTCTTGA 783 0.4828 MSESEVVCVTGGSGCIGSWLVHLLLTRGYTVHATVKDLKDDTETKHLEALEGASTRLRLFQIDLLQYETIVAAVRGCSGVFHLASPCIVDEVHDPQLWYPLSKTLAEKAAWDFAKEKDLDVVVVNPGTVMGPVISPRLNASMIMLVRLLEGCDETYENFFMGSVHFKDVALAHIMVYENKTATGRHLCVEAISHYGDFVAKVAELYPQYNVPKIPRDTQPGLLRAKDGSKKLMDLGLEFIPMEKIIKDAVESLKSKGFIS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1183 260 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 252 - -
Ahy7g1183 260 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 253 IPR036291 -
Ahy7g1183 260 CDD FR_SDR_e 7 237 - -
Ahy7g1183 260 Pfam GDP-mannose 4,6 dehydratase 9 95 IPR016040 -
Ahy7g1183 260 Gene3D - 1 92 - -
Ahy7g1183 260 Gene3D - 93 260 - -
Ahy7g1183 260 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 4 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1183 Ahy-Chr7 20869483 20872449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1183 3 260 Monolignol Biosynthesis Gene Families AT5G58490 60.625 3.26e-129 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1183 - - adu:107458329 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1434 17 25881798 25884634 Ahy7g1183 7 20869483 20872449 hybridization