Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1178 ATGGGATACACTTCACTGCTTAGAAGTCCAAAGAAAGAGGAAGAACAAGAAGTGCCAGAAGCTACTTTCTCCTCCTCCATATTACCCTTTTCCAATAACCACCAACTACTATACCACGATAATGATGATGAAGAATTCAGTATCTTGGAGCAACTTGAAGGAGTCTTGGACATTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAAAAGTTGTTACCATCTCCACAGCAGGGAATGGTAACTAGTTGTAGTGGCGATGATGAAGAGCTTCATTGGGATTTCATGGAATGGGAGGAGGATCATCATCAATTCCCAGAAGCAGAAAATGAATTGAAGGTAGTAGTAAGAGATGATAGCAGAATAAGCAATAATAACAAGTGCCTAATGGAGGAGGAGGTGAAGAAGATGGTAGTAAAGAGGGAAGAAGAAAGTAATAACAATAATATTTTTGGGTTTTGGGAAGTGGAAGATGAAAAGATGGTGGCTTTGAATTTGAATTTGAACTATCAAGAGGTTTTGGATGCTTGGTCTGACCGTGGCTCTCTCTGGGCTGATGACTACTCACTTTCATTGGCAACCACCAACAATGGCTACTACTATATGGGAGAAGTGCCAGTATTAGAAGAAGAAAGAACAAGAAGGGAAGCAAGTGTTCTAAGGTACAAAGAGAAGCGCCAGAACAGATTGTTCTCCAAGAAGATAAGATACCAAGTTCGGAAACTAAACGCAGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACACTGA 774 0.4031 MGYTSLLRSPKKEEEQEVPEATFSSSILPFSNNHQLLYHDNDDEEFSILEQLEGVLDIEEEEEEEEEEQKLLPSPQQGMVTSCSGDDEELHWDFMEWEEDHHQFPEAENELKVVVRDDSRISNNNKCLMEEEVKKMVVKREEESNNNNIFGFWEVEDEKMVALNLNLNYQEVLDAWSDRGSLWADDYSLSLATTNNGYYYMGEVPVLEEERTRREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1178 257 Coils Coil 49 69 - -
Ahy7g1178 257 Pfam CCT motif 214 256 IPR010402 GO:0005515
Ahy7g1178 257 MobiDBLite consensus disorder prediction 1 26 - -
Ahy7g1178 257 PANTHER CCT MOTIF FAMILY PROTEIN 3 257 - -
Ahy7g1178 257 ProSiteProfiles CCT domain profile. 214 256 IPR010402 GO:0005515
Ahy7g1178 257 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 3 257 - -
Ahy7g1178 257 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1178 Ahy-Chr7 20746830 20748744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1178 158 256 C2C2-CO-like Transcription Factor Family AT1G73870 44.828 1.34e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy7g1178 CCT 2.80E-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1178 - - aip:107608058 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1428 17 25684426 25686191 Ahy7g1178 7 20746830 20748744 hybridization