Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1139 ATGGCATCTTCTTCTGGTACCTTAGACACTACTTCTGCTTCCAATTCTTATACCAATAACTTCACTTTCTCGACACACCCATTCATGACCACTTCTTTCTCTGAACTCTTAGCTTCTTCCGCTGAAGACAAGCCTCGTGCTTCTGCAGCTGCTGTTGGTGTTCCTAAGTTCAAGTCTACACCACCACCGTCTTTGCCTCTCTCTCCACCACCCATTTCTCCTTCTTCTTATTTCGCTATTCCTCCTGGTTTGAGCCCTGCTGAACTTCTTGATTCCCCTGTTCTTCTTAATCCTTCTAACATTTTGCCATCTCCAACAACGGGGGCATTTGTTGCACATAACTACAATAATTGGAAGAACAACAACAATTCTGGTGGGAACCAACAACAAGTTATCATCAAAGAGGAAGAAGGAAAGAACAACAATTTCTCAAACTTCTCTTTCCAAACCCAGCCATCTATGTTTCAATCCTCATCAACTGCCACAACTCAAACACAGCAGCAGCAGCAGCCGCCATGGGGATTTCAAGAATCCAACAAGAAACAGGAAAATTTCTCATCATCAAAAACTGTGATGAAAACTGAGAACACTTGTTCCAACCAAAACAACAATGGGTTCCAATCAGATTACAGCAGCAACAACAATTACCAGCCACAATCTCAGACTCTAAGCAGAAGATCAGATGATGGTTACAATTGGAGAAAATATGGTCAGAAACAAGTGAAAGGTAGTGAGAATCCAAGAAGTTACTATAAATGCACATTCCCAAATTGCCCAACAAAAAAGAAAGTTGAGAGATCCTTGGATGGACAAATCACAGAGATTGTTTATAAGGGTACTCATAATCACCCTAAGCCTCAGAACACTAGGAGAAACTCTTCATCTTCTTCTAATTCTGCTGCTTTTGCAATTGCTCCCTCCAATCAAATGAACAACTCTGAGGTGACTGATCATCAATCTTATACACATGGTAGTGGGCAAATGGATTCTGTTGCCACCCCTGAGAACTCCTCAATTTCAGTTGGGGATGATGATTTTGAACAAAGCTCTCAGAGGTGTAAATCAGTTGGAGATGAATATGATGATGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGGGAAAATGAGGGAATATCAGGAGGTGGAAGTAGAACAGTGAGAGAACCAAGGGTTGTGGTTCAGACAACAAGTGACATAGATATCCTTGATGATGGCTACAGATGGAGGAAGTATGGCCAGAAAGTAGTTAAGGGCAATCCAAATCCAAGGAGCTACTACAAGTGCACACACCCAGGTTGTCCAGTGAGGAAGCATGTAGAGAGAGCCTCACATGACCTGAGGGCAGTGATAACAACCTATGAAGGCAAACACAACCATGATGTCCCCGCCGCCCGCGGCAGCGGAAGCCATGCCTCTGTCAACAGACCAATGCCCAACAACCACCACAACAATGCAAGCATTGCAATTAGGCCTTTACCATCAATGACACACCACAACAACAACAACACTAACAACGCTACTTCCCTTCAACAAGGGCCAGAAGGACAATCACCCTTCACACTTGAAATGCTTCAGAACCCTTCAAGCTATGGATTCTCATCTTCTGGGTTTGGGAATCCAATGGGTTCTTACATGCCTCAGCAGCAGCAACAACAGCAATCTGACAATGTGTTTTCTTCCAGAGCCAAGGAGGAACCTAGGGATGACATGTTCCTTGAATCTTTGCTATGCTGA 1737 0.4347 MASSSGTLDTTSASNSYTNNFTFSTHPFMTTSFSELLASSAEDKPRASAAAVGVPKFKSTPPPSLPLSPPPISPSSYFAIPPGLSPAELLDSPVLLNPSNILPSPTTGAFVAHNYNNWKNNNNSGGNQQQVIIKEEEGKNNNFSNFSFQTQPSMFQSSSTATTQTQQQQQPPWGFQESNKKQENFSSSKTVMKTENTCSNQNNNGFQSDYSSNNNYQPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQNTRRNSSSSSNSAAFAIAPSNQMNNSEVTDHQSYTHGSGQMDSVATPENSSISVGDDDFEQSSQRCKSVGDEYDDDEPDAKRWKIEGENEGISGGGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHASVNRPMPNNHHNNASIAIRPLPSMTHHNNNNTNNATSLQQGPEGQSPFTLEMLQNPSSYGFSSSGFGNPMGSYMPQQQQQQQSDNVFSSRAKEEPRDDMFLESLLC* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1139 578 MobiDBLite consensus disorder prediction 493 560 - -
Ahy7g1139 578 SUPERFAMILY WRKY DNA-binding domain 226 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy7g1139 578 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 41 552 - -
Ahy7g1139 578 ProSiteProfiles WRKY domain profile. 398 463 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g1139 578 MobiDBLite consensus disorder prediction 44 68 - -
Ahy7g1139 578 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 41 552 IPR044810 GO:0003700
Ahy7g1139 578 Pfam WRKY DNA -binding domain 404 460 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g1139 578 Pfam WRKY DNA -binding domain 228 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g1139 578 MobiDBLite consensus disorder prediction 493 578 - -
Ahy7g1139 578 ProSiteProfiles WRKY domain profile. 228 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g1139 578 MobiDBLite consensus disorder prediction 347 375 - -
Ahy7g1139 578 Gene3D WRKY domain 390 456 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy7g1139 578 SMART WRKY_cls 403 462 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g1139 578 SMART WRKY_cls 227 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g1139 578 MobiDBLite consensus disorder prediction 459 479 - -
Ahy7g1139 578 SUPERFAMILY WRKY DNA-binding domain 395 463 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy7g1139 578 MobiDBLite consensus disorder prediction 142 227 - -
Ahy7g1139 578 MobiDBLite consensus disorder prediction 142 232 - -
Ahy7g1139 578 MobiDBLite consensus disorder prediction 277 387 - -
Ahy7g1139 578 Gene3D WRKY domain 212 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy7g1139 578 MobiDBLite consensus disorder prediction 282 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1139 Ahy-Chr7 19295543 19299201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1139 47 577 WRKY Transcription Factor Family AT2G38470 48.066 3.61e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy7g1139 WRKY 1.60E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1139 K13424 - gmx:100127393 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1380 17 24188330 24191882 Ahy7g1139 7 19295543 19299201 hybridization
Ahy17g1380 17 24188330 24191882 Ahy7g1139 7 19295543 19299201 PCT
Ahy7g1139 7 19295543 19299201 Ahy17g1380 17 24188330 24191882 PCT
Ahy7g1139 7 19295543 19299201 Ahy7g1139 7 19295543 19299201 PCT