Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1100 ATGTTTGGATGTCCTGAGACAGAAAGAATAGATGAGATAGCAAAGAAGGTGAAGAAAGAGGGAGAATTATTATTATCATCAAGTTGTAGTGAAAGTGAAATAGAAAGAATGGGGAGGAAGCAAAGCTTAAACACAGTGACACCATGTGCTGCTTGCAAGCTTCTTAGAAGAAGGTGTGCTGAGGAGTGTCCCTTCTCTCCTTATTTCTCACCACATGAGCCTCAAAAGTTTGCTGCTGTTCATAAAGTCTTTGGTGCAAGCAATGTCTCCAAGATGCTCATGGAAGTAGGAGAGGGGCAAAGAGCAGATGCAGCAAACAGTTTGGTATATGAAGCAAACTTGAGATTAAGAGATCCGGTTTATGGATGCATGGGTGCAATTTCAGGTTTGCAGCAACAAATTCAAACATTGCAAGCGGAAGTCAATGCTGTTAGGGCTGAGATTCTCAAATACAAATATAGAGAAGCTGCTGCCACTGCCACTGCCACTCTCATTTCCATGAATCATCATCATCATCTTCCATCTAATAATAATAATAATCAAGCACCAATTATAATCAATAATAATAATGATAATAATGCTGCAAACTCTTCATCACAACAACAAGGTATTTCTCAACCTCCTCCTCTTCCTCCTCCGCCTTTGCGCCCTGCGCCGCCAAATCCATCTTTACCTTCACCTTCTACTGTTGTGCTTTCTTCATCTTTGTCTTCGTCTTCGGCTTCTTCTGTTTACAACAACACTCCACCTAAAACCACATTGAGTCATGGATCCATTACTAGTGAAAGTGTTCCTTACTTTGCTTAA 807 0.4077 MFGCPETERIDEIAKKVKKEGELLLSSSCSESEIERMGRKQSLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVGEGQRADAANSLVYEANLRLRDPVYGCMGAISGLQQQIQTLQAEVNAVRAEILKYKYREAAATATATLISMNHHHHLPSNNNNNQAPIIINNNNDNNAANSSSQQQGISQPPPLPPPPLRPAPPNPSLPSPSTVVLSSSLSSSSASSVYNNTPPKTTLSHGSITSESVPYFA* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1100 268 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 36 267 - -
Ahy7g1100 268 Coils Coil 127 154 - -
Ahy7g1100 268 MobiDBLite consensus disorder prediction 205 226 - -
Ahy7g1100 268 Pfam Lateral organ boundaries (LOB) domain 48 144 IPR004883 -
Ahy7g1100 268 MobiDBLite consensus disorder prediction 171 268 - -
Ahy7g1100 268 MobiDBLite consensus disorder prediction 171 204 - -
Ahy7g1100 268 PANTHER LOB DOMAIN PROTEIN 36 267 - -
Ahy7g1100 268 ProSiteProfiles LOB domain profile. 47 148 IPR004883 -
Ahy7g1100 268 MobiDBLite consensus disorder prediction 227 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1100 Ahy-Chr7 17577312 17579088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1100 12 156 AS2 family AT2G30340 70.270 2.84e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy7g1100 LOB 2.30E-39 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1334 17 22210160 22212165 Ahy7g1100 7 17577312 17579088 hybridization