Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1054 ATGAGTCCTCCTTTTGATCCTATCAGTAAGATCATTCCTCCACGTGAGGCCCGGAGGATCAAAGTCAGGGTACTAAGGGCTTGGACTGTACCTAGCTTTGGTAATGCAGATGTTCCAAATTCAATGGAACTTATTCTGGTTGATGAAAATTCTACCAAAATCCAGGCCACTATAAGGAAGCAACTAATACACAAGTTTAAAGATCATCTTCTTGAAGGCAGTTGTTATAAGATGAGTTATTTTGCTGTTGTTTCAAACCAAGGCTCTTATAGAGCTACAAAGCATGAGTTCAAACTCATTTTTCTATTTCGTACAACAGTGACAACAATTCCTGATGATATAATACCCAAGTCTTGTTTTTCTATATATCCCTTTGAAGACATATTGCAAATGAGTCAGGATCATGACTATTTAGTTGATGTAATTGGTCTTTTGACATTGGTTGGGGAAGAGAAAAACTATGACAGGGATGGTAAAACGGTTAAGATGGTTGTTGTCGAACTTTCTTCACAAAAGATGATGCTGCGATGCGCATTATTTGGAGAGTACGTGGACCAGTTAAATGATTTTCTTGCTTCTGGTTATGTTGAGCAACCGGTTGTCATTGTTCAACTTGCTAAGATTAAACTTTTTCGAGGTCAACCTGGTCTCCAGAATGTTATGAAAGCAACAAAAATTTACTTTAATCCTGATTTGTCAGAAGTTATTGATTTTTGA 717 0.371 MSPPFDPISKIIPPREARRIKVRVLRAWTVPSFGNADVPNSMELILVDENSTKIQATIRKQLIHKFKDHLLEGSCYKMSYFAVVSNQGSYRATKHEFKLIFLFRTTVTTIPDDIIPKSCFSIYPFEDILQMSQDHDYLVDVIGLLTLVGEEKNYDRDGKTVKMVVVELSSQKMMLRCALFGEYVDQLNDFLASGYVEQPVVIVQLAKIKLFRGQPGLQNVMKATKIYFNPDLSEVIDF* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1054 238 CDD RPA1_DBD_B_like 140 238 - -
Ahy7g1054 238 CDD RPA1_DBD_A_like 19 107 - -
Ahy7g1054 238 Pfam Domain of unknown function DUF223 43 138 IPR003871 -
Ahy7g1054 238 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 20 238 - -
Ahy7g1054 238 SUPERFAMILY Nucleic acid-binding proteins 3 113 IPR012340 -
Ahy7g1054 238 PANTHER REPLICATION FACTOR A 1, RFA1 20 238 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy7g1054 238 SUPERFAMILY Nucleic acid-binding proteins 120 237 IPR012340 -
Ahy7g1054 238 Gene3D - 4 112 IPR012340 -
Ahy7g1054 238 Gene3D - 114 238 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1054 Ahy-Chr7 15851474 15853855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1054 7 235 Core DNA Replication Machinery Family AT2G06510 24.790 4.83e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1054 - - ahf:112711209 449.514