Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0996 ATGGAGGAAGAGGATGAAGATGGAAGCGTTGAAAGCTTACTAAGATGGGCATCACAGATTGGAATATCGGATGCATCAACAACCACCCACCACTCTCTCTCTCTGGGTTCTTCTCTCTCTGTCTCTCACTTTCCTCACTCTGGAGGTAGAGGTTTGGGTGCTGTAAGAGACCTTAGGATGGGAGAACTCATTCTCAGAGTTCCAAAATCTGCTTTGATGACGACTGACAGTGTTATGCAAGATACAAACCTCTCTCAAGCTCTTAATAGGCACCCTTCTCTTTCTTCGACCCAGGTGGATGAGGCTATATGGGTAACTGAAAAAGCCGTGCTAAAAGCCAAATCAGAGTGGAAGCAAGCTCATGCTTTGATGGAAGATCTCAAATTTAAGCCCCAGCTTCTAACATTTAAGGCTTGGGTGTGGGCTTCTGCAACGATATCTTCCCGGACATTGCATATACCGTGGGATTCAGCTGGGTGTTTATGCCCTGTGGGTGACTTGTTTAATTATGATGCACCTGGAAAGGAGCCATCTGACATTGGGGATCTAGAGGATTTGCTATCTAGCTCTTCGATCCATGATGGTTCCTTATCAAATGAAGACAATACTACAGTCGCTGATGCAGAGCAGCTTGATTCCCAGTCTCAGAGATTAACAGATGGGGGGTTTGAAGATGATGCAAATGCATATTGCTTTTATGCTAGGGCAAATTACAATAAAGGAGATCAGGTTCTGCTATGTTATGGAACTTACACAAATTTGGAGCTTCTTGAACACTATGGTTTTATCCTACAAGAAAATCCAAATGATAAAGTTTTTATTCCTTTGGAACCTGCTGTGTATTCTTCCACTTCTTGGTCCAGGGAATCATTGTACATCCATTACAATGGGAAGCCTTCCTTTGCGCTACTAGCTGCATTGCGGCTGTGGGCGACCCCTCAAATCAAGAGGAGGTCTGTTGCACATTTTGTTTATTCCGGCTCTAAAATCTCTGCAGACAATGAAATTTTCATCATGAAATGGCTATCGAAGACTTGCCATGGTGTCTTAAAGAATTCGCCAACATCTATTGAAGATGACACCTTGCTCCTGAATGCAATGGATAATAGTCAAGATTTTTGTACTTTTTTGGAGGTTACAAAACTTATGTCTTTCCGGGATGAAGTTGATACCTTCTTAGAAGTTCATAATATGAAGGATAAATGTAGTGATAGCAATATAGTTTTATCTAGAAAAACAAGGTGGTCTATGAATAAGTAG 1260 0.4183 MEEEDEDGSVESLLRWASQIGISDASTTTHHSLSLGSSLSVSHFPHSGGRGLGAVRDLRMGELILRVPKSALMTTDSVMQDTNLSQALNRHPSLSSTQVDEAIWVTEKAVLKAKSEWKQAHALMEDLKFKPQLLTFKAWVWASATISSRTLHIPWDSAGCLCPVGDLFNYDAPGKEPSDIGDLEDLLSSSSIHDGSLSNEDNTTVADAEQLDSQSQRLTDGGFEDDANAYCFYARANYNKGDQVLLCYGTYTNLELLEHYGFILQENPNDKVFIPLEPAVYSSTSWSRESLYIHYNGKPSFALLAALRLWATPQIKRRSVAHFVYSGSKISADNEIFIMKWLSKTCHGVLKNSPTSIEDDTLLLNAMDNSQDFCTFLEVTKLMSFRDEVDTFLEVHNMKDKCSDSNIVLSRKTRWSMNK* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0996 419 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 6 95 - -
Ahy7g0996 419 ProSiteProfiles SET domain profile. 37 249 IPR001214 GO:0005515
Ahy7g0996 419 CDD SET_LSMT 48 263 - -
Ahy7g0996 419 Pfam Rubisco LSMT substrate-binding 299 370 IPR015353 -
Ahy7g0996 419 SUPERFAMILY SET domain 9 267 IPR046341 -
Ahy7g0996 419 Gene3D set domain protein methyltransferase, domain 1 92 263 - -
Ahy7g0996 419 PANTHER PROTEIN SET DOMAIN GROUP 40 98 418 - -
Ahy7g0996 419 PANTHER PROTEIN SET DOMAIN GROUP 40 6 95 - -
Ahy7g0996 419 Pfam SET domain 49 249 IPR001214 GO:0005515
Ahy7g0996 419 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 98 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0996 Ahy-Chr7 14522154 14525136 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy7g0996 SET 1.30E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0996 - - ahf:112702602 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1225 17 18278779 18282003 Ahy7g0996 7 14522154 14525136 hybridization