Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0954 ATGGATGCACAAGCTAAGAAAAAGGCAGATTTTCGTGCTAAATTGGCCCAGAAGAAAGAAAAGCGTATAGATTCTCCCCTTGTAAGGTATAATGAATTCAATCAACCTGTTTGTCGGGTTTGTGATCTTGTTCTGAAGTCTGAATCTATATGGGATGCACACCAAATCTCCCGTAAGCATCGCGAGGCGATTGATAATCTTAAAGCTAATGCAGCTGGATTAACTCAGCAAAACAATGCAAAGCCTGCTGTTGGTAACAGATTTCCCAAAGCCAAACCTGAACAACCTTCCGAACCACTATCCAAAAAGCCTGAACCTTCACAAGAAGTACCTAAAGCCCAGTCGTCGTCTGTGCTTCCACCAAATTTTTTTGATGACAGTGCAAGGAAAACCGAAAAGAAATCTGATTCAGGAAGAAATGTGGGAGTTTCTGCTCAAAGTCAGGTGTCAAAGTTGGAGGAAAGAGGTCATTTTCGTGGTCATGATGCTGCGCCGTCAAAGGTTAGTCAAGCAACAACAGAGACTAGGCAGACCTCAGCCAAAACTTCTGATGCAGAGGACAGCCAAACAAAAGGATCTCTGCCTGAAGGCTTTTTTGACAATAAGGATGCGGATTTACGGGCACGTGGCATTAAGCCTGTGAAGCCAGATGTCAAGGATGAGTACAAGGAGTTTGAGAAGCTGATTCAAGAGGACTTGAAGGAGGTGGATGACCGATTGGAAGAAGAAGAGATTGATGCTGCTGAAATGATAGAAGAAGCTGAATCCGTTGAACAAAAGATCTTCAGGGAGAGAGTGGAAATGTTGAAGAAAAAGAGACTGGAGCTGAAAGCAGCAAAGTCAGCAAAGCGAGGTAAAACTTGTGAGGGTGAAACCAAGGAGGAGTCAAGGCATGAAGAAGAGTCATCCAGTGATGATGAAAGTGGTGAGAATTTTGCTGTGGACTGGAGAGCACAACACTTGTGA 966 0.4389 MDAQAKKKADFRAKLAQKKEKRIDSPLVRYNEFNQPVCRVCDLVLKSESIWDAHQISRKHREAIDNLKANAAGLTQQNNAKPAVGNRFPKAKPEQPSEPLSKKPEPSQEVPKAQSSSVLPPNFFDDSARKTEKKSDSGRNVGVSAQSQVSKLEERGHFRGHDAAPSKVSQATTETRQTSAKTSDAEDSQTKGSLPEGFFDNKDADLRARGIKPVKPDVKDEYKEFEKLIQEDLKEVDDRLEEEEIDAAEMIEEAESVEQKIFRERVEMLKKKRLELKAAKSAKRGKTCEGETKEESRHEEESSSDDESGENFAVDWRAQHL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0954 321 Coils Coil 57 77 - -
Ahy7g0954 321 SUPERFAMILY beta-beta-alpha zinc fingers 30 70 IPR036236 -
Ahy7g0954 321 Coils Coil 1 21 - -
Ahy7g0954 321 Coils Coil 226 260 - -
Ahy7g0954 321 MobiDBLite consensus disorder prediction 279 321 - -
Ahy7g0954 321 PANTHER UNCHARACTERIZED 1 321 IPR040050 GO:0003676|GO:0005681|GO:0008270
Ahy7g0954 321 MobiDBLite consensus disorder prediction 71 202 - -
Ahy7g0954 321 Gene3D Classic Zinc Finger 31 69 - -
Ahy7g0954 321 MobiDBLite consensus disorder prediction 108 122 - -
Ahy7g0954 321 MobiDBLite consensus disorder prediction 279 304 - -
Ahy7g0954 321 Pfam Zinc-finger of C2H2 type 38 60 - -
Ahy7g0954 321 MobiDBLite consensus disorder prediction 166 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0954 Ahy-Chr7 13477167 13483776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0954 1 321 C2H2 Transcription Factor Family AT3G02860 52.870 2.51e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0954 K13104 - gmx:100808515 410.609