Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0924 ATGGCAACCGAAGAGGTTAATAAGCCTCCATCACTTCCTCCTTATCCTGAGATGATAATGGAGGCATTGGACGGACTCAATGAACCAAATGGATCCAACAAATCAGCCATATCGAGGTACATAGAGTCCACTTATGGAGAATTACCAGAGGGACACACAACACTCCTCAATCACCACCTCAACAAGATGAAAGACAGTGGGGAGCTTGTGTTCTTGAAGAACAACTACATGAAACCTGATGGTAGTCCGCCACCAAAAAGAGGCCGTGGAAGGCCGCCGAAGGCAAAGGAGCCACTTCCTCCGGGAACTGTTTTGTCATCCCCAAGGCCAAGGGGAAGGCCACCAAAGGATCCAAATGCACCACCAAAGTCACCGAAAGCAAAGCCTTCAGGTGGAAGTGGTAGGCCTAGAGGAAGGCCTAAGAAGATTCCCCGGACAGCGGCGCCGCCTCCACCGTCGCCGTTGAGTGCTCCTTCTACCCCTAGGGGTAGGGGTAGGCCTCCAAAGGTGAAGCCTCAATTGACAGAAGTGAGTGTTGAGATATAG 546 0.5147 MATEEVNKPPSLPPYPEMIMEALDGLNEPNGSNKSAISRYIESTYGELPEGHTTLLNHHLNKMKDSGELVFLKNNYMKPDGSPPPKRGRGRPPKAKEPLPPGTVLSSPRPRGRPPKDPNAPPKSPKAKPSGGSGRPRGRPKKIPRTAAPPPPSPLSAPSTPRGRGRPPKVKPQLTEVSVEI* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0924 181 SMART h15plus2 9 75 IPR005818 GO:0000786|GO:0003677|GO:0006334
Ahy7g0924 181 MobiDBLite consensus disorder prediction 95 125 - -
Ahy7g0924 181 PRINTS High mobility group protein (HMGY) signature 110 121 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Ahy7g0924 181 PRINTS High mobility group protein (HMGY) signature 123 142 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Ahy7g0924 181 PRINTS High mobility group protein (HMGY) signature 84 96 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Ahy7g0924 181 Pfam AT hook motif 134 143 IPR017956 GO:0003677
Ahy7g0924 181 Pfam AT hook motif 86 97 IPR017956 GO:0003677
Ahy7g0924 181 Pfam AT hook motif 108 119 IPR017956 GO:0003677
Ahy7g0924 181 Pfam AT hook motif 161 172 IPR017956 GO:0003677
Ahy7g0924 181 PRINTS AT-hook-like domain signature 106 117 IPR017956 GO:0003677
Ahy7g0924 181 PRINTS AT-hook-like domain signature 86 96 IPR017956 GO:0003677
Ahy7g0924 181 PRINTS AT-hook-like domain signature 132 142 IPR017956 GO:0003677
Ahy7g0924 181 PANTHER HMG-Y-RELATED PROTEIN A 1 177 IPR031059 GO:0003677|GO:0005634
Ahy7g0924 181 SUPERFAMILY "Winged helix" DNA-binding domain 8 87 IPR036390 -
Ahy7g0924 181 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 11 80 IPR005818 GO:0000786|GO:0003677|GO:0006334
Ahy7g0924 181 Gene3D - 7 94 IPR036388 -
Ahy7g0924 181 PANTHER HISTONE H1 1 177 - -
Ahy7g0924 181 MobiDBLite consensus disorder prediction 71 181 - -
Ahy7g0924 181 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Ahy7g0924 181 SMART AT_hook_2 134 146 IPR017956 GO:0003677
Ahy7g0924 181 SMART AT_hook_2 161 173 IPR017956 GO:0003677
Ahy7g0924 181 SMART AT_hook_2 108 120 IPR017956 GO:0003677
Ahy7g0924 181 Pfam linker histone H1 and H5 family 13 74 IPR005818 GO:0000786|GO:0003677|GO:0006334
Ahy7g0924 181 MobiDBLite consensus disorder prediction 143 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0924 Ahy-Chr7 12794038 12795482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0924 18 83 Single Myb Histone (SMH) Gene Family AT1G49950 39.394 2.38e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0924 - - gmx:100793697 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1124 17 15591948 15593505 Ahy7g0924 7 12794038 12795482 hybridization