Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0894 ATGCGGAGGCACAGTCCAGGATACTACAGTCCGCCGAGGAGAGGGTACGGCGGCAGGGGAAGATCTCCTCCGCCGCCACCTCCTCCGTCGAGGAGGGGTTACGGTGGTGGTGGCGGCGGCGGCGGCGGGAGGCGCGGCAGGGATAACAACAACAATGGAAGCCTTCTTGTTCGCAACATTCCCCTCGATTGCCGACCCGAGGAGCTTCGAGTCCCCTTCGAGCGGTTCGGACCCGTTCGTGATGTCTACATTCCCAAGGATTATTACTCAGGAGAACCTCGAGGCTTTGCGTTTGTGCAATTTGTGGATTCTTATGATGCTTCAGAGGCACAGTACCATATGAACAGACAAATCTTTGCTGGAAGGGAAATATCCGTCGTTGTTGCTGCTGAAACAAGAAAAAGACCAGAGGAAATGCGCCAAAGGACTAGGAGAGGACCATCGAACTATGGGGGGAGAAGGTCTTATTATGGTCGCTCGCGCTCTCGCTCAGTATCACGCTCTCCACCTTATCACTCTGGTTCTAGAAGTAGATATCGCTCAAGATCATATTCTCCTGCTCCAAGAAGGCAAAGTGATTACTCTATTTCCCCTAGAAGGCAAGCAGAACACTCTAGATCACCTCGATCACCAAGAGGCCCCCCTAGAGAGCGAGATGCTGATCAGAAGCGCAGATCATATACTCCAGATTTTGGCAATGGTGTTGATCAGAATCAAAGCAATGGATATCCTGAGAAATCTACATACAAGTCTGAGGCTGATGAAGGTCAGTGGAAGTCATCTGGACGTAGACCATCGAGGTCACCACCTGGATCCAGATCTAGGTCAAGGTCTCCTGATTTGTCTCCTAGACATTGA 858 0.5152 MRRHSPGYYSPPRRGYGGRGRSPPPPPPPSRRGYGGGGGGGGGRRGRDNNNNGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDSYDASEAQYHMNRQIFAGREISVVVAAETRKRPEEMRQRTRRGPSNYGGRRSYYGRSRSRSVSRSPPYHSGSRSRYRSRSYSPAPRRQSDYSISPRRQAEHSRSPRSPRGPPRERDADQKRRSYTPDFGNGVDQNQSNGYPEKSTYKSEADEGQWKSSGRRPSRSPPGSRSRSRSPDLSPRH* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0894 285 MobiDBLite consensus disorder prediction 1 57 - -
Ahy7g0894 285 SUPERFAMILY RNA-binding domain, RBD 50 160 IPR035979 GO:0003676
Ahy7g0894 285 MobiDBLite consensus disorder prediction 133 285 - -
Ahy7g0894 285 MobiDBLite consensus disorder prediction 196 226 - -
Ahy7g0894 285 PANTHER OS02G0252100 PROTEIN 30 283 - -
Ahy7g0894 285 Gene3D - 47 182 IPR012677 -
Ahy7g0894 285 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 55 124 IPR000504 GO:0003723
Ahy7g0894 285 MobiDBLite consensus disorder prediction 159 195 - -
Ahy7g0894 285 MobiDBLite consensus disorder prediction 231 247 - -
Ahy7g0894 285 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 53 131 IPR000504 GO:0003723
Ahy7g0894 285 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 30 283 - -
Ahy7g0894 285 SMART rrm1_1 54 127 IPR000504 GO:0003723
Ahy7g0894 285 MobiDBLite consensus disorder prediction 262 277 - -
Ahy7g0894 285 MobiDBLite consensus disorder prediction 18 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0894 Ahy-Chr7 12138831 12141580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0894 27 115 Eukaryotic Initiation Factors Gene Family AT3G11400 38.202 1.91e-07 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1091 17 14914078 14916825 Ahy7g0894 7 12138831 12141580 hybridization