Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0877 ATGGACTTCATCGGAGGGTTACAACAGTCTAAAGGGATGGACACAATTTTGGTAGTGGTTGATCGACTCTCCAAATATACTCATTTCTACCTGCTTGCACATCCCTTCTCAGCGAAAGACATTGCTCTCTTGTTCATTAAGGAGGTTGTTCACCTCCATGGGTTTCCATCCTCCATTGTCTCTGACCGCGACAAAATATTCATGAGTGCCTTTTGGTTTGAAGTATTCAAACAGGATGGAACCTCCTTGAAGATGTCCTCTGTATATCATCCACGAACCGACAGCCAAACGGAGGCTGTTAACAAATCGAATCAGAAGCTCGGTGTCAGATTTTATGGTCCATATGAAGTATTAAAGAAAATTGGTGTGGCGGCTTATAAACTTCGGCTACCACCCTCTGCAAAGATATATCCTATTTTTCATGTTTCACTACTTAAGAAGAGTTTGGGATCTTCAGTGGAATCACAAAGCTTATCTGAGGCTCTCACCGAGGAAGGAGAACTACTAGTGGAACCTGAACAAGTTCTGGACAACCGTATGAGCAACCAAGGAAACCTAGAAATGCTAATCAAGTCGCAGAATCTTTCCGAATTTGAAAGTACATGGGAGCGGGCCGACAAACTGCAGTTGGCCTTTCCATCTTTCCACCTTGAGGACAAGGTTGGTGGCGATAGATTGGACTCAACAGAAATTATTGGTAACACAAGAGAAGGAGGGTTGAATGAATGGCAGCAAAAGAGATTTTCTAGTGATGGTTGGAACATATTTCAAACTTCCAAGACTTATAATCTCAATGATGAACAACAACGTCAAAGTCCAAGAGCTCTTATTGAGGCATATGGTTGTCACAAAGGCCATGAAATTCCTAGTACTAAGCTTTTGTTAGTGGAGCAGCCTAGCAAAAATTGTTTAGGGAGCAAGTTTCCATTGGCATCATGGCAGGACACTGAAGAAGAGGAGTTTAATTGGAAATATGTGAATCCAGGATTAGTAGACTGTAGTAGAAACAGTAGTTCTATGCAATCAAATGTTAGATTCTCTAGGAAAAGGAAGTTATCTAATGATCTATCTAATTCTTCACAGTACCCCTTTAATATGGGGGTTGCTCCCCCTGCTGTCAATGCTCATGCTACTCGTCCTTCTGGCTTGAATCCAGCATTTCCATTGCAAAAATGTCCTAGGAGTCTGTTTGAACCAATAAATGTTAATAATGACACCAATATGGGTCATGGTCCAAATAGAACTATGTTTATACATGAATAG 1263 0.4117 MDFIGGLQQSKGMDTILVVVDRLSKYTHFYLLAHPFSAKDIALLFIKEVVHLHGFPSSIVSDRDKIFMSAFWFEVFKQDGTSLKMSSVYHPRTDSQTEAVNKSNQKLGVRFYGPYEVLKKIGVAAYKLRLPPSAKIYPIFHVSLLKKSLGSSVESQSLSEALTEEGELLVEPEQVLDNRMSNQGNLEMLIKSQNLSEFESTWERADKLQLAFPSFHLEDKVGGDRLDSTEIIGNTREGGLNEWQQKRFSSDGWNIFQTSKTYNLNDEQQRQSPRALIEAYGCHKGHEIPSTKLLLVEQPSKNCLGSKFPLASWQDTEEEEFNWKYVNPGLVDCSRNSSSMQSNVRFSRKRKLSNDLSNSSQYPFNMGVAPPAVNAHATRPSGLNPAFPLQKCPRSLFEPINVNNDTNMGHGPNRTMFIHE* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0877 420 SUPERFAMILY Chromo domain-like 135 209 IPR016197 -
Ahy7g0877 420 SUPERFAMILY Ribonuclease H-like 1 105 IPR012337 -
Ahy7g0877 420 Gene3D - 1 164 IPR036397 GO:0003676
Ahy7g0877 420 PANTHER YALI0A06105P 1 103 - -
Ahy7g0877 420 ProSiteProfiles Integrase catalytic domain profile. 1 103 IPR001584 GO:0015074
Ahy7g0877 420 ProSiteProfiles Chromo and chromo shadow domain profile. 170 213 IPR000953 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0877 Ahy-Chr7 11650627 11652918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0877 263 344 C2H2 Transcription Factor Family AT4G04885 36.905 1.32e-06 48.9