Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0871 ATGTCTTCGCATTGGTGTTACAGGTGCAATAAATTTGTGAGGGTATGGAGGCAGGACATTGTGATTTGTCCAGATTGCGATAGCGGTTTTGTCGAAGAGGTAGATCCTAACACACGCACCGTTTACGCCGATGGCAACCGCGGTCGACGGTTGCCGGCGGCAGCGATGTACATGATAGGCCACCATCAACGTCACCAGCGTCATAATTCCGTTGAAAATAACGCCGTCGCCACCACCACAAACGATAATAGCAATAATAATGACAACAACAATGTTAGCTTGTCGCGGCAAAATCAACGGCGACACTGCCGGAACACCAATGGCGGTGGCGGAGGAACAGGCGGTGACAGGTCGCCGATCAATCCGGTCATCATGCTCCGCGGCGGCGAGCAATCCGAGGGAACCAGCAGACGCAGGGGGTTCGAGCTTTTCTATGACGACGGCGCCGGTGCCGGTCTCCGTCCCTTGCCACCGAGCATGTCGGAGTTTCTCCTTGGAACAGGCTTCGATAGGGTTTTGGAGCAGTTCTCACATTTCGAAAGGCACGAGCGACACCTTCACCACCACAACCAGCCTCCTCCGGCGTCAAAATCCGCCGTAGAAGGCTTGCCGGAGGTGGAGATCACCGAGAACAACCTCGCCACAGAGCCACATTGCGCAGTTTGCAAGGAAGCCTTCGAGATCGGAACAAAAGCTAAAGAAATGCCGTGCAAGCACATATACCACTCGGACTGCATCTTGCCGTGGCTCGCCCTTCGAAACTCCTGCCCGGTTTGCCGCCACGAGTTGCCCACAGAACAAAACAATAACGGTCACGTGCAGAATGCGGCCACCAACAACAGCGCACGTGCCGATCAAGAAGATAACAATAACAATGATAACGGCAATAATAACAATGTGGGGCTAACAATATGGCGGTTACCGGGTGGCGGTTTTGCGGTTGGGAGGTTAACCGGTGCAGGAAGAGGGGGATCAGAGAGGGAAAATCTTCTTCCTGCTGTGTACACAGAAATGGATGGAGGAGGGTTTGATAGTAATAACAACAATAATAATAATGGTGGCGGTGGTGGTGGTGGTGGTGAGAGGAGGAGGGTTTCTTGGGCGGTTTCAACTACTTCAAGAGAGAGAGAAAGTGGTGGTGGGTTGAGGAGAATGATGAATAGTTTCTTTGGTTGCTTCAGACGTGGGAATCATGGTGCTCTTCATCATCATCATTCTTTTCCTTCTTCTTCTTCTCGGAATGGTGATTATCCTAGGCAGTATTCATCATCATCACCTTCAAATAGAAATAGAACTATGACAAATAATGGCACGGCACCTTCCGCTGTCAATTTCGATTTGGATCACTCCCCTTTGCGTCAACGCAGGACTTGGTCTATGGATGTAAATAGTGGTGGTTCTAGAGCTTGGTGA 1413 0.5096 MSSHWCYRCNKFVRVWRQDIVICPDCDSGFVEEVDPNTRTVYADGNRGRRLPAAAMYMIGHHQRHQRHNSVENNAVATTTNDNSNNNDNNNVSLSRQNQRRHCRNTNGGGGGTGGDRSPINPVIMLRGGEQSEGTSRRRGFELFYDDGAGAGLRPLPPSMSEFLLGTGFDRVLEQFSHFERHERHLHHHNQPPPASKSAVEGLPEVEITENNLATEPHCAVCKEAFEIGTKAKEMPCKHIYHSDCILPWLALRNSCPVCRHELPTEQNNNGHVQNAATNNSARADQEDNNNNDNGNNNNVGLTIWRLPGGGFAVGRLTGAGRGGSERENLLPAVYTEMDGGGFDSNNNNNNNGGGGGGGGERRRVSWAVSTTSRERESGGGLRRMMNSFFGCFRRGNHGALHHHHSFPSSSSRNGDYPRQYSSSSPSNRNRTMTNNGTAPSAVNFDLDHSPLRQRRTWSMDVNSGGSRAW* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0871 470 Pfam Protein of unknown function (DUF1117) 300 416 IPR010543 -
Ahy7g0871 470 MobiDBLite consensus disorder prediction 77 106 - -
Ahy7g0871 470 SMART ring_2 219 259 IPR001841 -
Ahy7g0871 470 MobiDBLite consensus disorder prediction 402 450 - -
Ahy7g0871 470 MobiDBLite consensus disorder prediction 336 381 - -
Ahy7g0871 470 CDD RING-H2_RNF126_like 219 260 - -
Ahy7g0871 470 SUPERFAMILY RING/U-box 200 267 - -
Ahy7g0871 470 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 179 267 IPR013083 -
Ahy7g0871 470 MobiDBLite consensus disorder prediction 281 301 - -
Ahy7g0871 470 MobiDBLite consensus disorder prediction 77 121 - -
Ahy7g0871 470 Pfam Ring finger domain 218 260 IPR001841 -
Ahy7g0871 470 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE PROTEIN 2 388 - -
Ahy7g0871 470 ProSiteProfiles Zinc finger RING-type profile. 219 260 IPR001841 -
Ahy7g0871 470 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 2 388 - -
Ahy7g0871 470 MobiDBLite consensus disorder prediction 404 443 - -
Ahy7g0871 470 MobiDBLite consensus disorder prediction 341 355 - -
Ahy7g0871 470 Pfam zinc-ribbon 3 33 IPR039525 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0871 Ahy-Chr7 11535163 11538042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0871 193 266 C3H Transcription Factor Family AT5G15820 57.333 1.36e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0871 - K11982 zju:107413417 386.341