Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0830 ATGTCAATGTTGGTTACTGAGGACAACAACAACAACAACAATAATAAGCCTCATGTTGTTGTTGACGTAGACAATAATGTCTCTCAAGGTAGTACTAGTAGCTGTGTCGGCAATGAAGGTTGTGCTTCTTCTGAGACAAGTGAGGAACAACAACAAAGTAATTCCCATGATTCTGGTTCCGAGATTGTTGCTGGAGCAATTGAGAAAGAGAGAGGGTCTTCAGTTTCATCAGATCAGTGTTCTGTGGAGCTTGTGGATCTGGAGAGTGATGTGGATAAGGTACAGCACTTAGATCATGATAATAATAATAATAAGGTGGAGAGGGATTGCAGGATTTGTCACCTAAGCATGGATATGACCAACCATGAATCTGGTGGGTCCCCCATTGAACTTGGTTGTTCTTGTAAGGATGATTTGGCTGCTGCACATAAACAATGTGCTGAGGCTTGGTTCAAGATCAAAGGCAACAAAACTTGTGAAATTTGTGGATCAATTGCACACAATGTAGCCGGCACAATCGAAGTTCAAATGACAGAACAGTGGAATGACTCCAATGATGCTTCCATGGCTCCACCAACCGGGCCTGCACCCCCGGCCGGCGAAACTCGAAACTTCTGGCAGGGACATCGTTTTTTGAATTTCCTACTAGCTTGTATGGTCTTTGCATTTGTCATATCCTGGCTTTTTCACTTCAATGTGCCCTCATGA 708 0.435 MSMLVTEDNNNNNNNKPHVVVDVDNNVSQGSTSSCVGNEGCASSETSEEQQQSNSHDSGSEIVAGAIEKERGSSVSSDQCSVELVDLESDVDKVQHLDHDNNNNKVERDCRICHLSMDMTNHESGGSPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSIAHNVAGTIEVQMTEQWNDSNDASMAPPTGPAPPAGETRNFWQGHRFLNFLLACMVFAFVISWLFHFNVPS* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0830 235 MobiDBLite consensus disorder prediction 25 59 - -
Ahy7g0830 235 Pfam RING-variant domain 110 162 IPR011016 GO:0008270
Ahy7g0830 235 MobiDBLite consensus disorder prediction 1 20 - -
Ahy7g0830 235 SMART ringv_2 109 163 IPR011016 GO:0008270
Ahy7g0830 235 PANTHER ZINC FINGER, RING-CH-TYPE 21 235 - -
Ahy7g0830 235 SUPERFAMILY RING/U-box 105 165 - -
Ahy7g0830 235 CDD RING_CH-C4HC3_MARCH 110 163 - -
Ahy7g0830 235 ProSiteProfiles Zinc finger RING-CH-type profile. 102 169 IPR011016 GO:0008270
Ahy7g0830 235 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 21 235 - -
Ahy7g0830 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 171 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0830 Ahy-Chr7 10614344 10617831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0830 16 235 C3H Transcription Factor Family AT5G05830 53.394 2.06e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0830 - - adu:107457785 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1007 17 12743690 12747116 Ahy7g0830 7 10614344 10617831 hybridization