Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0829 ATGACCGAAGAAGAAGACCGAGCATCCGTTGAACCAATCGCCGGCAATGGCGTCTCTCTTCCGCAAGAGCTCGTTGGAGGAGGAGGTACGGCCGAGACGGAGCCAGCGGGACGCGATGCGGAGGTGACTGTAGTTGGTGACGGCAATACTGGTGGTGGTGCTGCCGCGGGAAAAGTAAAGGGACCGTGGTCTCCGGAAGAGGATGCGGTACTGAGCCGATTGGTGGCGCAGTTCGGAGCGAGGAATTGGAGCATGATCGCGCGGGGAGTTCCAGGCAGGTCAGGGAAGTCATGCCGGCTCCGATGGTGTAACCAGCTGGATCCTTGTGTTAAACGCAAGCCTTTCACTGGTAATTTCCATTGCCGCTGTGTTTCAGATTGGATGTGTGTAGAATTAGAGGAAGAAGATTGCATTATCGTATCAGCCCATGCAATCCATGGAAACAAGTGGGCAGCTATTGCAAGGCTTCTTCCAGGTAGAACAGATAATGCAATCAAGAACCACTGGAACTCTACCCTAAAGCGCAGGTGTATGGAACAGGGAAGATATGTCCCTCCACGTGTTGAAGCGATGGAAGATGGTAACATTGAGAAAACAAAGGCATCCTCTGAAGAAACCCTGTCAGTTGAGGATATGAATTCATTTCCTACACAAGTTAGAAATGTGGTTATGAATACTGAGATTAAACAGCACGAAGATAAACCTCCAACTACAAGAAATGATGTTTCCGAAGTGGAGCAAAATCCTACCCTTCATCGACCAGTAGCACGTATTAGTGCATTCAGTGTTTATAATCCTACAAGCAGGCCTACAAATGGATCATCAAGTTCAAAGATTCTGCCATTGCAAAGCCCTTTATTCCAACTACCCAAAGCAGTTGAAGGAGCCTGCAAATTATTTGATGGTATTGAATGTGAACCAATGGTTCCATTGCAATGTAGTCATGGATGCTGTGCACCAGAATCAGGGGGAAGCCATTCTCATGGTTCTTCGCTATTAGGTCCCGAGTTTGTTGACTATTTGGATTCTCCCCCTTTCTTAAGTCATGAACTGATTTCCATAGCTACAGACCTAAATAACATGGCATGGATCAAGAGTGGCCTTGAGAACCATGGAGGTGCCAAAGTAACCGATAATGCCGCAAACTTGACAGGATCACAGGGGGCTGCTACTGTTTCTCAAACGGGCTTCTTAGGCCAAGGCCAAAAGAATGACTTCATGCAAATGCAATATGAGGAGGGACCAGGAAAGGTCATGTTTCTGGGTACAAATACAATGAAAGAAATGTTATCATCGAAGATGCCTCGGCAACATTTCGCAATGCCTGCAGAAGTTTGA 1338 0.4723 MTEEEDRASVEPIAGNGVSLPQELVGGGGTAETEPAGRDAEVTVVGDGNTGGGAAAGKVKGPWSPEEDAVLSRLVAQFGARNWSMIARGVPGRSGKSCRLRWCNQLDPCVKRKPFTGNFHCRCVSDWMCVELEEEDCIIVSAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRCMEQGRYVPPRVEAMEDGNIEKTKASSEETLSVEDMNSFPTQVRNVVMNTEIKQHEDKPPTTRNDVSEVEQNPTLHRPVARISAFSVYNPTSRPTNGSSSSKILPLQSPLFQLPKAVEGACKLFDGIECEPMVPLQCSHGCCAPESGGSHSHGSSLLGPEFVDYLDSPPFLSHELISIATDLNNMAWIKSGLENHGGAKVTDNAANLTGSQGAATVSQTGFLGQGQKNDFMQMQYEEGPGKVMFLGTNTMKEMLSSKMPRQHFAMPAEV* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0829 445 SMART sant 59 108 IPR001005 -
Ahy7g0829 445 SMART sant 133 175 IPR001005 -
Ahy7g0829 445 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 177 IPR017930 -
Ahy7g0829 445 PANTHER MYB PROTEIN-RELATED 41 371 - -
Ahy7g0829 445 MobiDBLite consensus disorder prediction 1 62 - -
Ahy7g0829 445 Gene3D - 132 205 - -
Ahy7g0829 445 CDD SANT 133 173 IPR001005 -
Ahy7g0829 445 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 110 IPR017930 -
Ahy7g0829 445 CDD SANT 62 104 IPR001005 -
Ahy7g0829 445 Pfam Myb-like DNA-binding domain 60 106 IPR001005 -
Ahy7g0829 445 Pfam Myb-like DNA-binding domain 133 172 IPR001005 -
Ahy7g0829 445 Gene3D - 59 111 - -
Ahy7g0829 445 ProSiteProfiles Myb-like domain profile. 55 106 IPR001005 -
Ahy7g0829 445 SUPERFAMILY Homeodomain-like 57 169 IPR009057 -
Ahy7g0829 445 PANTHER MYB TRANSCRIPTION FACTOR-LIKE PROTEIN 41 371 - -
Ahy7g0829 445 ProSiteProfiles Myb-like domain profile. 133 173 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0829 Ahy-Chr7 10599779 10603927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0829 58 407 MYB Transcription Factor Family AT3G55730 46.006 7.15e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy7g0829 Myb_DNA-binding 3.60E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0829 K09422 - gmx:100781228 504.212