Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0823 ATGCGAGACAGAGACACTTTGTCTTTCATTGGAGCACAACAAAAGTGCAAGGCTTGTGACAAAACAGTGTACCCAGTTGATCAACCATCAGCTGATGCCATTGCTTACCATAAAGCTTCTTATTGTAAGCCTTATTATGAGCATCTCTTCATGGAGACAGGAACTTTCAAACAGAACTTCCAATCACCTTCAAAGGTAGCTGATAAGACCAAACCTGAGCTGACAAGATCCCCTAGTAAGGCAGCTAGTATGCTTTCTGGGACGCAAGAAAAATGTGCAACATGGGCTAAAATTGCGTATCCATTGGAGAAGGTAGGATTTAGATTACGTCCATCCCACTCGAAGGCCTATCATAAATCATGCTTTAAATGTTCACATGGTAGATGTCCAATAACAACATCCAATGATGCAGCACTTGAGGTTGTCTTGTACTGCAAGCACCATTTCTCGCAGCTTTTTAAGAAAGGGAGCTATAATCATCTCAATAAGTCTGCATCCATAAAACGGGCACCAACCTCTACTCCACATTTATGA 534 0.4176 MRDRDTLSFIGAQQKCKACDKTVYPVDQPSADAIAYHKASYCKPYYEHLFMETGTFKQNFQSPSKVADKTKPELTRSPSKAASMLSGTQEKCATWAKIAYPLEKVGFRLRPSHSKAYHKSCFKCSHGRCPITTSNDAALEVVLYCKHHFSQLFKKGSYNHLNKSASIKRAPTSTPHL* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0823 177 PANTHER OS06G0237300 PROTEIN 8 40 IPR045268 GO:0051015
Ahy7g0823 177 ProSiteProfiles LIM domain profile. 90 155 IPR001781 -
Ahy7g0823 177 PANTHER LIM DOMAIN-CONTAINING PROTEIN WLIM2B 8 40 - -
Ahy7g0823 177 PANTHER LIM DOMAIN-CONTAINING PROTEIN WLIM2B 40 175 - -
Ahy7g0823 177 Pfam LIM domain 113 152 IPR001781 -
Ahy7g0823 177 Gene3D Cysteine Rich Protein 77 157 - -
Ahy7g0823 177 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 123 160 - -
Ahy7g0823 177 PANTHER OS06G0237300 PROTEIN 40 175 IPR045268 GO:0051015
Ahy7g0823 177 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 9 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0823 Ahy-Chr7 10487606 10490393 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy7g0823 LIM 3.30E-06 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0823 K09377 - gmx:100809121 246.514