Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0802 ATGGAGTTCACCTCTTTTTCATGGGAAATCAATTCTAAAGAAGATCCAAGCATACCACAAGACTCCTATTTCGATGATTGTTTTTCCATCATTTTCAGATTCACCAAAGAATTGATCCAAATTACTCAAAGCACAAATTTTCCTTCTACTACAAGTACGGCCAATGAATCGTTCTTGGTTCCTTCTGATATCCTATGTAACTTCAGAGAAAACACTGCATTCTTACATGAAACCTTCTCTTCAGTGCCTATATCCCCGGAGATATTGGATCAAATTTTACCTGTCATTGGCGAAACCGCAAGAACGATTCTAAGCCATGAAGGGTGTGACTCCAATATGCGGAGCATTTTTGTGAACCTTTATGTTACCACGCGCATTGTTATTGAAGATTCTGATTTCTATAATGATGATATCGGTCAAAATATTCCTGAACCAGCTCAGTTCGTGAATCTGTTGGAGAGATCAAAAATTGATGAGCAAGATGATGATGTTGAAGAACAATGTGCTATTTGTTTGGAAGAGTTTGAACATGGTATTGAAGATTCACGTGTAGCGATTGTTCGTACAAATTGCTCGCATCTGTTCCATGAATGTTGTATATTCCGATGGTTTCGGCGTTGTGCCGACCGTCAATCGCCTTATTCTTGCCCATTGTGCCGCTGCAACATATTTCCAACCTCACAGAGAGATGAATAG 696 0.3937 MEFTSFSWEINSKEDPSIPQDSYFDDCFSIIFRFTKELIQITQSTNFPSTTSTANESFLVPSDILCNFRENTAFLHETFSSVPISPEILDQILPVIGETARTILSHEGCDSNMRSIFVNLYVTTRIVIEDSDFYNDDIGQNIPEPAQFVNLLERSKIDEQDDDVEEQCAICLEEFEHGIEDSRVAIVRTNCSHLFHECCIFRWFRRCADRQSPYSCPLCRCNIFPTSQRDE* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0802 231 Pfam Ring finger domain 167 220 IPR001841 -
Ahy7g0802 231 ProSiteProfiles Zinc finger RING-type profile. 168 220 IPR001841 -
Ahy7g0802 231 SMART ring_2 168 219 IPR001841 -
Ahy7g0802 231 SUPERFAMILY RING/U-box 158 226 - -
Ahy7g0802 231 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 123 225 - -
Ahy7g0802 231 CDD RING-H2 168 220 - -
Ahy7g0802 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 225 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0802 Ahy-Chr7 10141026 10141721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0802 93 230 C3H Transcription Factor Family AT1G68070 28.261 2.94e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0802 - - adu:110273516 359.377