Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0801 ATGAAATCTTTTCTTCAGTGCCTGCATCCCGAGTTATTGAACCAAATTTTACCTGCCATAGGCGAAACTGCAAGAAGGATTCTAAGCCGTGAAGGGTGTGACTCCAACACGCGGGAGATTGTTGTGAACCTTCACGTTGTTACCAGGCGCAACATTGTTCAAGACTCTGATATCTATAATGATGATCTCTGTGAAAACGTTCCTGAACTAACACAACTCGTGAATCTGTTAGAGAGATCCAAAATTGATGAGCAAGATGATGACGCTGAATGCGCTATTTGCTTGGAGAAGTTTGGCCATGGTAACGAAGATTCAAGTGTAGACGTTGTTCGCATAAATTGCTCGCATGTTTTTCATGATCGTTGCATGCTCCGCTGGCTCCGATGCTGTGCCGACCATCAGTCGCCGTATTCTTGCCCATTGTGCCGCTGCCTCATATCTGCAACTTCACACGGTGACGATGAATAG 468 0.4551 MKSFLQCLHPELLNQILPAIGETARRILSREGCDSNTREIVVNLHVVTRRNIVQDSDIYNDDLCENVPELTQLVNLLERSKIDEQDDDAECAICLEKFGHGNEDSSVDVVRINCSHVFHDRCMLRWLRCCADHQSPYSCPLCRCLISATSHGDDE* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0801 155 CDD RING-H2 91 143 - -
Ahy7g0801 155 SMART ring_2 91 142 IPR001841 -
Ahy7g0801 155 Pfam Ring finger domain 90 143 IPR001841 -
Ahy7g0801 155 ProSiteProfiles Zinc finger RING-type profile. 91 143 IPR001841 -
Ahy7g0801 155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 149 IPR013083 -
Ahy7g0801 155 SUPERFAMILY RING/U-box 83 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0801 Ahy-Chr7 10122827 10123294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0801 76 143 C3H Transcription Factor Family AT4G12190 38.889 3.12e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0801 - - ahf:112762800 298.901