Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0778 ATGAGGAAGCCCAAGAAGTTACCTTTTTTACCATCATTGGAACATAAGTACTTGAGGGTTTCTTATGGAGAGCTACATCAAGCAACAAATGGATTTTCTTCATCCAATTTAGTTGGCACAGGAAGTTTTGGTTCTGTGTATAGAGGAACCCTTGTTCATTTTGAGAGACCTGTTGCCGTGAAAGTGTTGAACCTTCAAACACGCGGCGCATCAAAGAGTTTCATGGCCGAATGCAAAGCTCTAGGAAAAATCAAGCACAGAAACCTTATCAACATATTGACTTGTTGTTCAAGTGTTGATTACAAAGGGGATGATTTCAAGGCCATAGTGTTTGAGTTCATGCCTAATGGGAGTCTAGAAACCTTGTTACACCACACTATTGAAGATAGCGAGTCAACAAATCCAAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTACCTTCACAATGATTTAGAGGAAGCTGTAGTTCATTGTGATATAAAGCCAAGCAATATTTTACTTGATGATGACATGGTTGCCCACTTGGGAGACTTTGGATTAGCTAGGCTTGTTCATGGTGTCGCAAGCCACTCTAGCAGTGATAAAGGAAGTTCCTCAGTAATCAAGGGAACCATCGGATATGTTCCACCAGGTAAAATTAAAGATTTAATTTTTCTTTTTAATCTCTTTTGGTAA 702 0.3903 MRKPKKLPFLPSLEHKYLRVSYGELHQATNGFSSSNLVGTGSFGSVYRGTLVHFERPVAVKVLNLQTRGASKSFMAECKALGKIKHRNLINILTCCSSVDYKGDDFKAIVFEFMPNGSLETLLHHTIEDSESTNPSLNLMQRVNIALDVAFALDYLHNDLEEAVVHCDIKPSNILLDDDMVAHLGDFGLARLVHGVASHSSSDKGSSSVIKGTIGYVPPGKIKDLIFLFNLFW* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0778 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Ahy7g0778 233 SMART serkin_6 32 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy7g0778 233 PANTHER LRR RECEPTOR-LIKE KINASE 2 220 - -
Ahy7g0778 233 ProSiteProfiles Protein kinase domain profile. 32 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy7g0778 233 Gene3D Phosphorylase Kinase; domain 1 12 113 - -
Ahy7g0778 233 Gene3D Transferase(Phosphotransferase) domain 1 114 225 - -
Ahy7g0778 233 Pfam Protein kinase domain 34 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy7g0778 233 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 220 - -
Ahy7g0778 233 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Ahy7g0778 233 SUPERFAMILY Protein kinase-like (PK-like) 6 222 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0778 Ahy-Chr7 9722643 9723716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0778 1 219 Receptor kinase-like Gene Family AT3G47570 52.444 8.63e-75 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy7g0778 Pkinase 3.20E-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0778 - - ahf:112702394 366.696