LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy7g0770	ATGGGAAATTTGGGAAGAAACGTTGAAAATTCTTATGACGGGAAGGACTTCTATTTCTTCACTATTCTGAAGAGGAAGTTCTCGACTAACAACTTGAGGAAGGTTCGCACCATCGAGTTGGGTTCTTGGGAAGGTGAAGACATCGGAAAAGAGATTATGCCGAATAAAACTAACCAGCGCATTGGAATGAGAAAACGATATCGCTTTGAAAAGAGTGTTACTAGCCATGATGGTGGATGGATCTTGCATCAATATAGCATTGATTCTTCTTTGTTACCAAATCCTTCCAATACCTTACTTATTTACATATTAGACAATAATGGAGATGAAAAGATTGATGAGATTCAGAAAAAACTAACAAATCAATTAGAGAATAATAATGGAGATGAAAAGATTGATAAGATTCAGAAAGAACTAACAAATCAATTAGAGAATAATAAGGATGAAATAAAGGTTGAGACTTTGGTTACTACTATTGGAATTGAGGTAAACTCTGACGAAATGGAAGATGGTGATGATGATGAAGATCACAATGATATGACATGGCCAGAGTTTTTTGCAAGCAATTGGTAG	573	0.3525	MGNLGRNVENSYDGKDFYFFTILKRKFSTNNLRKVRTIELGSWEGEDIGKEIMPNKTNQRIGMRKRYRFEKSVTSHDGGWILHQYSIDSSLLPNPSNTLLIYILDNNGDEKIDEIQKKLTNQLENNNGDEKIDKIQKELTNQLENNKDEIKVETLVTTIGIEVNSDEMEDGDDDEDHNDMTWPEFFASNW*	191

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy7g0770	190	Pfam	No apical meristem (NAM) protein	11	87	IPR003441	GO:0003677\|GO:0006355
	Ahy7g0770	190	Gene3D	NAC domain	5	142	IPR036093	GO:0003677\|GO:0006355
	Ahy7g0770	190	ProSiteProfiles	NAC domain profile.	1	106	IPR003441	GO:0003677\|GO:0006355
	Ahy7g0770	190	SUPERFAMILY	NAC domain	12	93	IPR036093	GO:0003677\|GO:0006355
	Ahy7g0770	190	PANTHER	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	15	162	-	-
	Ahy7g0770	190	PANTHER	NAC TRANSCRIPTION FACTOR-LIKE PROTEIN	15	162	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy7g0770	Ahy-Chr7	9562930	9564637	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy7g0770	15	88	NAC Transcription Factor Family	AT3G15170	35.526	2.90e-08	50.4

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	NAC	Ahy7g0770		NAM	2.90E-08	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy7g0770	-		-	ahf:112701106	378.637