Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0748 ATGGAGAATGGTGGTAAAATGATCAAGAAAACTAAAAGGAGACAAAAGAGAGAGATAAAGAGGATTGAGAATAAGAAAAACTGTCAAATCGCTTTTACAAAGAGAAAAGACGGCTTACTGAAAAAGGCGAATGAAATAAAATCTTTATGTGATGCTGGTGTTGATTTGATCATATATTCTTCAAGTGGAAAAGCCTATTACTATGGCGATTCTTCATTAAAGACAATAAAAATGGCTCTCTCAAATGAACAACAACCTCAAAATAGTAATCAGTTCTTTGGTTACATCATGGAGGAAATGTCTAGGAAGGACATGCAGAATCTGGTTAAAAAGAACGATTCACTTGTGGATCGATTAAATGCTGAGAAAGAACGAGCTAAAACTCTTTCTAACATTTTAAAGACAATTAAAGCTGACAACAGCACCGCCAATTGGTGGGATACAATTAGTCAAAATCAAACCATGATTCAAGTTAATCCTGGAGTTATTGGACCATACCGTGCTCATGGAAGTATGAGTACTTTTTTCAACATAACTTTTGCTACCGGTGTCAACCCTTTTGACGCTACGAGAAGATTTGGTAACCAAAATGTCCCTGTTTGGTATCCATCATACCAATACCAACAAGGATATAATGATCTATTTCTCTATGATGCAAGTAATAGGAATGGTGTTGGAAGAAGCAGTGGCGGCGACGACACTAAAAATTATCTTTACCATTCAAATTATAACTATAGCAACAATGGTGGAGGCTTTTTTGGTTTTCCATACCATAATAATCCATTTAACAATGGTTATGGCTGCGAAAGATTCTTCTAA 819 0.3553 MENGGKMIKKTKRRQKREIKRIENKKNCQIAFTKRKDGLLKKANEIKSLCDAGVDLIIYSSSGKAYYYGDSSLKTIKMALSNEQQPQNSNQFFGYIMEEMSRKDMQNLVKKNDSLVDRLNAEKERAKTLSNILKTIKADNSTANWWDTISQNQTMIQVNPGVIGPYRAHGSMSTFFNITFATGVNPFDATRRFGNQNVPVWYPSYQYQQGYNDLFLYDASNRNGVGRSSGGDDTKNYLYHSNYNYSNNGGGFFGFPYHNNPFNNGYGCERFF* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0748 272 PRINTS MADS domain signature 34 49 IPR002100 GO:0003677|GO:0046983
Ahy7g0748 272 PRINTS MADS domain signature 14 34 IPR002100 GO:0003677|GO:0046983
Ahy7g0748 272 PRINTS MADS domain signature 49 70 IPR002100 GO:0003677|GO:0046983
Ahy7g0748 272 ProSiteProfiles MADS-box domain profile. 12 72 IPR002100 GO:0003677|GO:0046983
Ahy7g0748 272 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 21 68 IPR002100 GO:0003677|GO:0046983
Ahy7g0748 272 PANTHER SERUM RESPONSE FACTOR HOMOLOG 14 135 - -
Ahy7g0748 272 SUPERFAMILY SRF-like 14 77 IPR036879 GO:0003677|GO:0046983
Ahy7g0748 272 Coils Coil 105 125 - -
Ahy7g0748 272 Gene3D - 24 92 IPR036879 GO:0003677|GO:0046983
Ahy7g0748 272 SMART madsneu2 12 71 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0748 Ahy-Chr7 8957516 8959098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0748 7 158 Type I MADS-box Gene Family AT5G60440 29.412 2.17e-17 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Ahy7g0748 SRF-TF 1.20E-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0748 - - ahf:112701097 501.901