Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy7g0746 | ATGCCTGTATTCTCCGAGTTATTGGACCAAATTTTACCTGCCATAGGTAGAACTGCAAGAAGGATTCTAAGGCGGCGCCGTCAAGGGTGTGACTCCTACACGCCGGAGATTGTTGTGAACCTTCATGTTACCACGTACATTATTGTTCAAGATTTAGATATCTATAATGATGATGCTGAATGCGTTATTTGTTTGGAGGAGTTTGGCCATGGTAACGAAGATTCAAGTGTAGGAATTGTTCGCACAAATTGTTCGCATGTTTTCCATGATCGCTGCATGCTCCGTTGGCTCCGACAGTGTGTCAACTGTCAGTTGCCGTATTCTTGCCCATTGTGCCGCTGCATCATATTTCCAACTTCACATAGTCACGATAAATAG | 378 | 0.4392 | MPVFSELLDQILPAIGRTARRILRRRRQGCDSYTPEIVVNLHVTTYIIVQDLDIYNDDAECVICLEEFGHGNEDSSVGIVRTNCSHVFHDRCMLRWLRQCVNCQLPYSCPLCRCIIFPTSHSHDK* | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy7g0746 | 125 | CDD | RING-H2 | 61 | 113 | - | - | |
| Ahy7g0746 | 125 | Pfam | Ring finger domain | 60 | 113 | IPR001841 | - | |
| Ahy7g0746 | 125 | ProSiteProfiles | Zinc finger RING-type profile. | 61 | 113 | IPR001841 | - | |
| Ahy7g0746 | 125 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 41 | 119 | IPR013083 | - | |
| Ahy7g0746 | 125 | SUPERFAMILY | RING/U-box | 47 | 119 | - | - | |
| Ahy7g0746 | 125 | SMART | ring_2 | 61 | 112 | IPR001841 | - | |
| Ahy7g0746 | 125 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 56 | 117 | - | - | |
| Ahy7g0746 | 125 | PANTHER | ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN | 56 | 117 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy7g0746 | Ahy-Chr7 | 8832147 | 8832524 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy7g0746 | 35 | 121 | C3H Transcription Factor Family | AT5G47610 | 35.789 | 5.17e-10 | 52.4 |